The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama15239 | P53 INDUCED PROTEIN |
Ama15240 | FI24210P1 |
Ama15242 | |
Ama15243 | SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED |
Ama15244 | |
Ama15245 | MONOCARBOXYLATE TRANSPORTER |
Ama15246 | MONOCARBOXYLATE TRANSPORTER |
Ama15247 | MONOCARBOXYLATE TRANSPORTER |
Ama15248 | |
Ama15249 | MONOCARBOXYLATE TRANSPORTER |
Ama15250 | |
Ama15251 | MONOCARBOXYLATE TRANSPORTER |
Ama15252 | MONOCARBOXYLATE TRANSPORTER |
Ama15253 | WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 |
Ama15254 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
Ama15255 | REVERSE TRANSCRIPTASES |
Ama15256 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5 FAMILY MEMBER |
Ama15257 | FARNESYL-PYROPHOSPHATE SYNTHETASE |
Ama15258 | CHROMOBOX PROTEIN |
Ama15259 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN |
Ama15261 | MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B |
Ama15262 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9 |
Ama15263 | METHYLTRANSFERASE |
Ama15265 | PHOSPHATIDYLCHOLINE TRANSFER PROTEIN |
Ama15266 | TIPA |
Ama15267 | ASPARTYL AMINOPEPTIDASE |
Ama15268 | ANKYRIN DOMAIN-CONTAINING |
Ama15269 | |
Ama15270 | |
Ama15271 | |
Ama15272 | |
Ama15273 | ANKYRIN REPEAT-CONTAINING |
Ama15274 | SUGAR KINASE |
Ama15275 | TRANSMEMBRANE PROTEIN 136 |
Ama15276 | TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED |
Ama15277 | |
Ama15278 | |
Ama15279 | |
Ama15280 | PHD FINGER PROTEINS |
Ama15282 | AMP DEAMINASE |
Ama15283 | GAMMA GLUTAMYL TRANSPEPTIDASE |
Ama15284 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
Ama15285 | |
Ama15286 | |
Ama15287 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Ama15289 | MONOCARBOXYLATE TRANSPORTER |
Ama15290 | MONOCARBOXYLATE TRANSPORTER |
Ama15292 | MONOCARBOXYLATE TRANSPORTER |
Ama15294 | B-CELL TRANSLOCATION GENE |
Ama15295 | MONOCARBOXYLATE TRANSPORTER |