The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama15446 | PHOSPHATIDYLINOSITOL KINASE |
Ama15447 | TYROSINE-PROTEIN KINASE RECEPTOR |
Ama15448 | PRENYLATED RAB ACCEPTOR 1-RELATED |
Ama15449 | VACUOLAR ATP SYNTHASE SUBUNIT F |
Ama15450 | |
Ama15451 | SOLUTE CARRIER FAMILY 39 |
Ama15452 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
Ama15453 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
Ama15454 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
Ama15455 | |
Ama15456 | TITIN |
Ama15460 | |
Ama15463 | FMRFAMIDE RECEPTOR-RELATED |
Ama15464 | |
Ama15465 | PUTATIVE-RELATED |
Ama15466 | PROTEIN CBG03580 |
Ama15469 | BONUS, ISOFORM C-RELATED |
Ama15470 | THAP DOMAIN PROTEIN |
Ama15471 | ATP-DEPENDENT DNA HELICASE |
Ama15472 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama15473 | THAP DOMAIN PROTEIN |
Ama15475 | |
Ama15476 | |
Ama15477 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
Ama15478 | |
Ama15479 | TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT |
Ama15480 | ENDONUCLEASE-RELATED |
Ama15481 | |
Ama15482 | PARANEOPLASTIC ANTIGEN |
Ama15483 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama15484 | |
Ama15485 | |
Ama15488 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama15489 | THAP DOMAIN PROTEIN |
Ama15490 | HSC70CB, ISOFORM G-RELATED |
Ama15492 | |
Ama15493 | PHYTANOYL-COA DIOXYGENASE-RELATED-RELATED |
Ama15494 | |
Ama15495 | DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN |
Ama15496 | BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR |
Ama15497 | AMMECR1 HOMOLOG |
Ama15498 | CELL CYCLE CONTROL PROTEIN CWF15 |
Ama15499 | SOLUTE CARRIER FAMILY 25 |
Ama15500 | LEUCINE RICH REPEAT PROTEIN |
Ama15501 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama15502 | NITRIC OXIDE SYNTHASE OXYGENASE |
Ama15503 | NITRIC OXIDE SYNTHASE OXYGENASE |
Ama15504 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama15507 | |
Ama15508 |