The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama15645 | FIBRILLIN-RELATED |
Ama15650 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama15651 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama15652 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama15653 | |
Ama15655 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama15656 | THAP DOMAIN PROTEIN |
Ama15657 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama15658 | |
Ama15659 | |
Ama15660 | |
Ama15661 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama15662 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama15663 | ZINC FINGER PROTEIN |
Ama15664 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
Ama15665 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama15666 | PHOSPHOLIPID SCRAMBLASE-RELATED |
Ama15667 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama15668 | THAP DOMAIN PROTEIN |
Ama15669 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama15670 | C2H2-TYPE DOMAIN-CONTAINING PROTEIN |
Ama15671 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama15672 | |
Ama15673 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama15674 | PEPTIDASE |
Ama15675 | |
Ama15676 | ARMADILLO-TYPE FOLD-RELATED |
Ama15677 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama15678 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 |
Ama15679 | |
Ama15680 | |
Ama15681 | |
Ama15682 | |
Ama15683 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama15684 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Ama15687 | HAUS AUGMIN-LIKE COMPLEX SUBUNIT 5 |
Ama15689 | ZINC FINGER AND BTB DOMAIN-CONTAINING |
Ama15691 | DNA POLYMERASE |
Ama15692 | DNA POLYMERASE |
Ama15693 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama15695 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama15696 | MUCIN 4-RELATED |
Ama15697 | |
Ama15698 | |
Ama156_5db7b01a | |
Ama15700 | |
Ama15702 | - |
Ama15703 | |
Ama15704 | PUTATIVE-RELATED |
Ama15705 | PUTATIVE-RELATED |