The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
| Gene ID | Description |
|---|---|
| Ama15706 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
| Ama15707 | THAP DOMAIN PROTEIN |
| Ama15709 | |
| Ama15711 | |
| Ama15713 | |
| Ama15715 | |
| Ama15716 | DEOXYRIBONUCLEASE TATDN2-RELATED |
| Ama15717 | |
| Ama15718 | |
| Ama15720 | NEPHRIN |
| Ama15722 | SIDESTEP PROTEIN |
| Ama15723 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Ama15724 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Ama15725 | |
| Ama15727 | |
| Ama15728 | PROTEIN CBG26694 |
| Ama15729 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Ama15733 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Ama15734 | |
| Ama15735 | |
| Ama15736 | |
| Ama15737 | UNCHARACTERIZED |
| Ama15738 | CONTACTIN 5 |
| Ama15739 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8 |
| Ama15740 | |
| Ama15743 | |
| Ama15745 | |
| Ama15746 | INHIBITOR OF APOPTOSIS |
| Ama15747 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
| Ama15748 | |
| Ama15749 | CONTACTIN 5 |
| Ama15750 | B-CELL RECEPTOR CD22 |
| Ama15751 | |
| Ama15752 | CONTACTIN 5 |
| Ama15754 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8 |
| Ama15755 | CONTACTIN 5 |
| Ama15756 | NEPHRIN |
| Ama15757 | |
| Ama15758 | |
| Ama15759 | |
| Ama15760 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| Ama15761 | PERIAXIN-LIKE |
| Ama15762 | |
| Ama15764 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Ama15765 | REVERSE TRANSCRIPTASES |
| Ama15766 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Ama15767 | |
| Ama15768 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8 |
| Ama15769 | |
| Ama15770 | NEPHRIN |
