The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama16023 | UNCHARACTERIZED NODULIN-LIKE PROTEIN |
Ama16028 | |
Ama16030 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama16032 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama16034 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama16035 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama16038 | PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED |
Ama16039 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Ama16040 | |
Ama16043 | |
Ama16046 | UNCHARACTERIZED NODULIN-LIKE PROTEIN |
Ama16048 | REVERSE TRANSCRIPTASES |
Ama16049 | |
Ama16051 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama16052 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama16054 | |
Ama16055 | |
Ama16056 | |
Ama16059 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama16060 | |
Ama16061 | B-CELL RECEPTOR CD22 |
Ama16063 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8 |
Ama16064 | NEPHRIN |
Ama16065 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
Ama16066 | SGNH_HYDRO DOMAIN-CONTAINING PROTEIN |
Ama16068 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
Ama16070 | |
Ama16071 | NEPHRIN |
Ama16072 | NEPHRIN |
Ama16073 | NEPHRIN |
Ama16074 | NEPHRIN |
Ama16075 | INHIBITOR OF APOPTOSIS |
Ama16076 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama16077 | CONTACTIN 5 |
Ama16078 | |
Ama16079 | |
Ama16081 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
Ama16082 | NEPHRIN |
Ama16083 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
Ama16085 | NEPHRIN |
Ama16087 | |
Ama16088 | |
Ama16089 | |
Ama16090 | |
Ama16091 | |
Ama16092 | |
Ama16093 | |
Ama16094 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama16095 | |
Ama16096 |