The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama16336 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama16337 | TRANSPOSON |
Ama16338 | |
Ama16339 | PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED |
Ama16340 | ZINC FINGER PROTEIN |
Ama16341 | PROTEIN NAKED CUTICLE |
Ama16342 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
Ama16344 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
Ama16345 | 40S RIBOSOMAL PROTEIN S3A |
Ama16347 | DYNEIN LIGHT CHAIN ROADBLOCK |
Ama16348 | MACROGLOBULIN / COMPLEMENT |
Ama16349 | EUKARYOTIC TRANSLATION INITIATION FACTOR 6 |
Ama16352 | FMRFAMIDE RECEPTOR-RELATED |
Ama16354 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama16355 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama16356 | FMRFAMIDE RECEPTOR-RELATED |
Ama16358 | ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-BINDING PROTEIN |
Ama16359 | SODIUM/HYDROGEN EXCHANGER |
Ama16360 | SODIUM/HYDROGEN EXCHANGER |
Ama16361 | MONOCARBOXYLATE TRANSPORTER |
Ama16362 | MONOCARBOXYLATE TRANSPORTER |
Ama16363 | CENTROSOMAL PROTEIN OF 89 KDA |
Ama16364 | BIFUNCTIONAL TH2 PROTEIN |
Ama16365 | |
Ama16366 | |
Ama16367 | BIFUNCTIONAL TH2 PROTEIN |
Ama16370 | PAR-6-RELATED |
Ama16371 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10 |
Ama16372 | MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM21 |
Ama16374 | MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN |
Ama16375 | RAS-RESPONSIVE ELEMENT-BINDING PROTEIN 1 |
Ama16377 | |
Ama16378 | TRANSIENT RECEPTOR POTENTIAL CHANNEL 4-ASSOCIATED PROTEIN TCPC4AP |
Ama16379 | DER1-LIKE PROTEIN, DERLIN |
Ama16380 | WD REPEAT CONTAINING PROTEIN 3 WDR3 |
Ama16381 | MRNA GUANINE-7- METHYLTRANSFERASE |
Ama16383 | MULTI-COPPER OXIDASE |
Ama16384 | |
Ama16387 | UNCHARACTERIZED |
Ama16389 | SERINE/THREONINE-PROTEIN KINASE PLK |
Ama16390 | RAB GDP-DISSOCIATION INHIBITOR |
Ama16391 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
Ama16392 | |
Ama16395 | NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING |
Ama16396 | NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING |
Ama16397 | |
Ama16398 | ALANYL-TRNA SYNTHETASE |
Ama16403 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama16404 | DJ-1 PROTEIN |
Ama16405 |