The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama16406 | N-ACYL-PHOSPHATIDYLETHANOLAMINE-HYDROLYZING PHOSPHOLIPASE D |
Ama16407 | N-ACYL-PHOSPHATIDYLETHANOLAMINE-HYDROLYZING PHOSPHOLIPASE D |
Ama16408 | ZINC FINGER PROTEIN |
Ama16409 | DJ-1 PROTEIN |
Ama16410 | N-ACYL-PHOSPHATIDYLETHANOLAMINE-HYDROLYZING PHOSPHOLIPASE D |
Ama16411 | ZINC FINGER PROTEIN |
Ama16412 | NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING |
Ama16413 | |
Ama16415 | - |
Ama16418 | |
Ama16419 | |
Ama16420 | DNA LIGASE |
Ama16422 | |
Ama16423 | SSM4 PROTEIN |
Ama16424 | |
Ama16426 | |
Ama16427 | ASTEROID PROTEIN |
Ama16429 | |
Ama16430 | |
Ama16431 | INHIBITOR OF APOPTOSIS |
Ama16432 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama16433 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama16434 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama16435 | ASTEROID PROTEIN |
Ama16437 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama16438 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama16439 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama16440 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama16441 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama16442 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama16443 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama16444 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama16445 | |
Ama16446 | ASTEROID PROTEIN |
Ama16447 | |
Ama16448 | NUCLEAR PORE COMPLEX PROTEIN NUP155 |
Ama16449 | DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE |
Ama16450 | LIM DOMAIN-CONTAINING PROTEIN JUB |
Ama16451 | |
Ama16452 | D-RIBITOL-5-PHOSPHATE CYTIDYLYLTRANSFERASE |
Ama16453 | |
Ama16455 | TYROSINE-PROTEIN KINASE RECEPTOR |
Ama16456 | |
Ama16457 | FMRFAMIDE RECEPTOR-RELATED |
Ama16458 | |
Ama16459 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
Ama16460 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Ama16461 | TYROSINASE FAMILY MEMBER |
Ama16462 | UNC-93 RELATED |
Ama16463 | UNC-93 RELATED |