About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_036580-T1
LLU|FUN_036581-T1
LLU|FUN_036582-T1RNA POLYMERASE II-ASSOCIATED PROTEIN 3
LLU|FUN_036583-T1
LLU|FUN_036584-T1
LLU|FUN_036585-T1
LLU|FUN_036586-T1
LLU|FUN_036587-T1
LLU|FUN_036588-T1
LLU|FUN_036589-T1ZINC FINGER PROTEIN
LLU|FUN_036590-T1
LLU|FUN_036591-T1
LLU|FUN_036592-T1CELL ADHESION MOLECULE
LLU|FUN_036593-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_036594-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_036595-T1SET DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_036596-T1
LLU|FUN_036597-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
LLU|FUN_036598-T1
LLU|FUN_036599-T1
LLU|FUN_036600-T1
LLU|FUN_036601-T1
LLU|FUN_036602-T1TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 10B
LLU|FUN_036603-T1
LLU|FUN_036604-T1
LLU|FUN_036605-T1
LLU|FUN_036606-T1
LLU|FUN_036607-T1
LLU|FUN_036608-T1UNCHARACTERIZED
LLU|FUN_036609-T1UNCHARACTERIZED
LLU|FUN_036610-T1DYNEIN HEAVY CHAIN
LLU|FUN_036611-T1
LLU|FUN_036612-T1
LLU|FUN_036613-T1
LLU|FUN_036614-T1
LLU|FUN_036615-T1
LLU|FUN_036616-T1
LLU|FUN_036617-T1
LLU|FUN_036618-T1
LLU|FUN_036619-T1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
LLU|FUN_036620-T1
LLU|FUN_036621-T1C2H2 ZINC FINGER CGI-62-RELATED
LLU|FUN_036622-T1MYOTUBULARIN-RELATED
LLU|FUN_036623-T1VACUOLAR PROTEIN 8
LLU|FUN_036624-T1
LLU|FUN_036625-T1
LLU|FUN_036626-T1
LLU|FUN_036627-T1
LLU|FUN_036628-T1
LLU|FUN_036629-T1PROTEIN CBG20488
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