About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_036530-T1
LLU|FUN_036531-T1
LLU|FUN_036532-T1
LLU|FUN_036533-T1
LLU|FUN_036534-T1
LLU|FUN_036535-T1
LLU|FUN_036536-T1
LLU|FUN_036537-T1TRANSCRIPTION FACTOR AP-2
LLU|FUN_036538-T1
LLU|FUN_036539-T1TRANSCRIPTION FACTOR AP-2
LLU|FUN_036540-T1
LLU|FUN_036541-T1LEUCOKININ RECEPTOR-RELATED
LLU|FUN_036542-T1LEUCOKININ RECEPTOR-RELATED
LLU|FUN_036543-T1
LLU|FUN_036544-T1LEUCOKININ RECEPTOR-RELATED
LLU|FUN_036545-T1LEUCOKININ RECEPTOR-RELATED
LLU|FUN_036546-T1LEUCOKININ RECEPTOR-RELATED
LLU|FUN_036547-T1
LLU|FUN_036548-T1
LLU|FUN_036549-T1LEUCYL-TRNA SYNTHETASE
LLU|FUN_036550-T1PROTEIN CBG03580
LLU|FUN_036551-T1INOSINE TRIPHOSPHATE PYROPHOSPHATASE/HAM1 PROTEIN
LLU|FUN_036552-T1REGULATOR OF CHROMOSOME CONDENSATION
LLU|FUN_036553-T1TRANSLATION FACTOR
LLU|FUN_036554-T1
LLU|FUN_036555-T1ATP-DEPENDENT DNA HELICASE
LLU|FUN_036556-T1
LLU|FUN_036557-T1
LLU|FUN_036558-T1
LLU|FUN_036559-T1
LLU|FUN_036560-T1
LLU|FUN_036561-T1
LLU|FUN_036562-T1
LLU|FUN_036563-T1
LLU|FUN_036564-T1
LLU|FUN_036565-T1
LLU|FUN_036566-T1
LLU|FUN_036567-T1RNA-BINDING MOTIF PROTEIN, X-LINKED 2
LLU|FUN_036568-T1SIMILAR TO CHROMOSOME 3 OPEN READING FRAME 20
LLU|FUN_036569-T1
LLU|FUN_036570-T1
LLU|FUN_036571-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_036572-T1PHOSPHOGLYCERATE KINASE
LLU|FUN_036573-T1ZNF44 PROTEIN
LLU|FUN_036574-T1ZINC FINGER PROTEIN
LLU|FUN_036575-T1
LLU|FUN_036576-T1EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN
LLU|FUN_036577-T1
LLU|FUN_036578-T1
LLU|FUN_036579-T1TETRATRICOPEPTIDE REPEAT PROTEIN 6
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