About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_036428-T1
LLU|FUN_036429-T1DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
LLU|FUN_036430-T1U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10
LLU|FUN_036431-T1BONUS, ISOFORM C-RELATED
LLU|FUN_036432-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
LLU|FUN_036433-T1
LLU|FUN_036434-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
LLU|FUN_036435-T1ZIPPER PUTATIVE TUMOR SUPPRESSOR 2 HOMOLOG-LIKE PROTEIN-RELATED
LLU|FUN_036436-T1
LLU|FUN_036437-T1
LLU|FUN_036438-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
LLU|FUN_036439-T1
LLU|FUN_036441-T1
LLU|FUN_036442-T1
LLU|FUN_036443-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
LLU|FUN_036444-T1
LLU|FUN_036445-T1
LLU|FUN_036446-T1
LLU|FUN_036447-T1CYTOKINE RECEPTOR
LLU|FUN_036448-T1
LLU|FUN_036449-T1CYTOKINE RECEPTOR
LLU|FUN_036450-T1CYTOKINE RECEPTOR
LLU|FUN_036451-T1
LLU|FUN_036452-T1LASP
LLU|FUN_036453-T1
LLU|FUN_036454-T1MUCIN-22
LLU|FUN_036455-T1S-ANTIGEN PROTEIN
LLU|FUN_036456-T1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_036457-T1ALDEHYDE DEHYDROGENASE-RELATED
LLU|FUN_036458-T1
LLU|FUN_036459-T1SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
LLU|FUN_036460-T1SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
LLU|FUN_036461-T1
LLU|FUN_036462-T1-
LLU|FUN_036463-T1SYNAPSIN
LLU|FUN_036464-T1
LLU|FUN_036465-T1
LLU|FUN_036466-T1
LLU|FUN_036467-T1
LLU|FUN_036468-T1NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNIT
LLU|FUN_036469-T1PROTEIN B, PUTATIVE-RELATED-RELATED
LLU|FUN_036470-T1
LLU|FUN_036471-T1
LLU|FUN_036472-T1
LLU|FUN_036473-T1
LLU|FUN_036474-T1
LLU|FUN_036475-T1
LLU|FUN_036476-T1
LLU|FUN_036477-T1DNA PRIMASE SMALL SUBUNIT
LLU|FUN_036478-T1
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