About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_036378-T1
LLU|FUN_036379-T1CARBONIC ANHYDRASE
LLU|FUN_036380-T1
LLU|FUN_036381-T1PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1
LLU|FUN_036382-T1
LLU|FUN_036383-T1PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1
LLU|FUN_036384-T1HEAT SHOCK PROTEIN 70KDA
LLU|FUN_036385-T1
LLU|FUN_036386-T1PEST PROTEOLYTIC SIGNAL-CONTAINING NUCLEAR PROTEIN
LLU|FUN_036387-T1RHO GTPASE-ACTIVATING PROTEIN 68F
LLU|FUN_036388-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_036389-T1
LLU|FUN_036390-T1
LLU|FUN_036391-T1KINESIN-ASSOCIATED PROTEINS
LLU|FUN_036392-T1AD-003 - RELATED
LLU|FUN_036393-T1CRUMBS FAMILY MEMBER
LLU|FUN_036394-T1SPINSTER
LLU|FUN_036395-T1
LLU|FUN_036396-T1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4
LLU|FUN_036397-T1
LLU|FUN_036398-T1
LLU|FUN_036399-T1
LLU|FUN_036400-T1
LLU|FUN_036401-T1
LLU|FUN_036402-T1RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
LLU|FUN_036403-T1
LLU|FUN_036404-T1
LLU|FUN_036405-T1PHOSPHATIDYLCHOLINE TRANSFER PROTEIN
LLU|FUN_036406-T1
LLU|FUN_036407-T1
LLU|FUN_036408-T1SULFITE REDUCTASE
LLU|FUN_036409-T1
LLU|FUN_036410-T1SULFITE REDUCTASE
LLU|FUN_036411-T1
LLU|FUN_036412-T1CS DOMAIN-CONTAINING PROTEIN
LLU|FUN_036413-T1NG5
LLU|FUN_036414-T1UBIQUITIN THIOESTERASE
LLU|FUN_036415-T1
LLU|FUN_036416-T1
LLU|FUN_036417-T1KINESIN-RELATED PROTEIN 6
LLU|FUN_036418-T1KINESIN-RELATED PROTEIN 6
LLU|FUN_036419-T1ZINC FINGER PROTEIN
LLU|FUN_036420-T1
LLU|FUN_036421-T1
LLU|FUN_036422-T1
LLU|FUN_036423-T1
LLU|FUN_036424-T1
LLU|FUN_036425-T1
LLU|FUN_036426-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
LLU|FUN_036427-T1
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