About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_036479-T1TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED
LLU|FUN_036480-T1
LLU|FUN_036481-T1HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN
LLU|FUN_036482-T1NUCLEOLAR PROTEIN OF 40 KDA
LLU|FUN_036483-T1RAN BINDING PROTEIN 9-RELATED
LLU|FUN_036484-T1ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
LLU|FUN_036485-T1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
LLU|FUN_036486-T1BILE ACID BETA-GLUCOSIDASE-RELATED
LLU|FUN_036487-T1MITOGEN-ACTIVATED PROTEIN KINASE
LLU|FUN_036488-T1
LLU|FUN_036489-T1HVA22-LIKE PROTEINS
LLU|FUN_036490-T1ARGININE OR CREATINE KINASE
LLU|FUN_036491-T1ARGININE OR CREATINE KINASE
LLU|FUN_036492-T1
LLU|FUN_036493-T1
LLU|FUN_036494-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_036495-T1NG5
LLU|FUN_036496-T1
LLU|FUN_036497-T1CONDENSIN COMPLEX SUBUNIT 3-RELATED
LLU|FUN_036498-T1
LLU|FUN_036499-T1DUAL SPECIFICITY PROTEIN PHOSPHATASE
LLU|FUN_036500-T1
LLU|FUN_036501-T1SULFITE REDUCTASE
LLU|FUN_036502-T1
LLU|FUN_036503-T1
LLU|FUN_036504-T1
LLU|FUN_036505-T1
LLU|FUN_036506-T1
LLU|FUN_036507-T1
LLU|FUN_036508-T1GALACTOCEREBROSIDASE
LLU|FUN_036509-T1
LLU|FUN_036510-T1
LLU|FUN_036511-T1
LLU|FUN_036512-T1
LLU|FUN_036514-T1
LLU|FUN_036515-T1
LLU|FUN_036516-T1SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN
LLU|FUN_036517-T1
LLU|FUN_036518-T1
LLU|FUN_036519-T1
LLU|FUN_036520-T1FUSELESS, ISOFORM A
LLU|FUN_036521-T1KELCH DOMAIN-CONTAINING PROTEIN
LLU|FUN_036522-T1DNA POLYMERASE EPSILON SUBUNIT B
LLU|FUN_036523-T1
LLU|FUN_036524-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_036525-T1
LLU|FUN_036526-T1
LLU|FUN_036527-T1
LLU|FUN_036528-T1
LLU|FUN_036529-T1
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