About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_036277-T1SORTING NEXIN 17 AND 27
LLU|FUN_036278-T1NUCLEOTIDE KINASE
LLU|FUN_036279-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_036280-T1
LLU|FUN_036281-T1
LLU|FUN_036282-T1
LLU|FUN_036283-T1
LLU|FUN_036284-T1
LLU|FUN_036285-T1
LLU|FUN_036286-T1
LLU|FUN_036287-T1
LLU|FUN_036288-T1
LLU|FUN_036289-T1
LLU|FUN_036290-T1
LLU|FUN_036291-T1
LLU|FUN_036292-T1EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP
LLU|FUN_036293-T1
LLU|FUN_036294-T1
LLU|FUN_036295-T1
LLU|FUN_036296-T1
LLU|FUN_036297-T1NEL HOMOLOG
LLU|FUN_036298-T1
LLU|FUN_036299-T1SHIPPO-1-RELATED
LLU|FUN_036300-T1
LLU|FUN_036301-T1
LLU|FUN_036302-T1HISTONE DEACETYLASE HDAC1-RELATED
LLU|FUN_036303-T1
LLU|FUN_036304-T1
LLU|FUN_036305-T1STAR-RELATED LIPID TRANSFER PROTEIN 9
LLU|FUN_036306-T1
LLU|FUN_036307-T1IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
LLU|FUN_036308-T1COILIN
LLU|FUN_036309-T1
LLU|FUN_036310-T1SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
LLU|FUN_036311-T1
LLU|FUN_036312-T1
LLU|FUN_036313-T1
LLU|FUN_036314-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_036315-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_036316-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_036317-T1
LLU|FUN_036318-T1
LLU|FUN_036319-T1
LLU|FUN_036320-T1PROTEIN CBG11839-RELATED
LLU|FUN_036321-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_036322-T1PROTEIN CBG12054-RELATED
LLU|FUN_036323-T1ATILLA, ISOFORM B-RELATED-RELATED
LLU|FUN_036324-T1RBP-RELATED
LLU|FUN_036325-T1
LLU|FUN_036326-T1
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