About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_036026-T1HISTIDINE-RICH GLYCOPROTEIN
LLU|FUN_036027-T1
LLU|FUN_036028-T1NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12
LLU|FUN_036029-T1
LLU|FUN_036030-T1
LLU|FUN_036031-T1
LLU|FUN_036032-T1OVOCHYMASE-RELATED
LLU|FUN_036033-T1
LLU|FUN_036034-T1OVOCHYMASE-RELATED
LLU|FUN_036035-T1SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
LLU|FUN_036036-T1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
LLU|FUN_036037-T1
LLU|FUN_036038-T1
LLU|FUN_036039-T1OVOCHYMASE-RELATED
LLU|FUN_036040-T1SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
LLU|FUN_036041-T1OVOCHYMASE-RELATED
LLU|FUN_036042-T1
LLU|FUN_036043-T1SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
LLU|FUN_036044-T1
LLU|FUN_036045-T1
LLU|FUN_036046-T1RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
LLU|FUN_036047-T1
LLU|FUN_036048-T1
LLU|FUN_036049-T1
LLU|FUN_036050-T1SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
LLU|FUN_036051-T1
LLU|FUN_036052-T1
LLU|FUN_036053-T1HOMEOBOX PROTEIN ARISTALESS
LLU|FUN_036054-T1
LLU|FUN_036055-T1
LLU|FUN_036056-T1PEROXISOME ASSEMBLY PROTEIN 10
LLU|FUN_036057-T1CELL DIVISION CYCLE-ASSOCIATED PROTEIN 3
LLU|FUN_036058-T1
LLU|FUN_036059-T1SEPTIN
LLU|FUN_036060-T1
LLU|FUN_036061-T1
LLU|FUN_036062-T1ATP-DEPENDENT RNA HELICASE
LLU|FUN_036063-T1RETINITIS PIGMENTOSA GTPASE REGULATOR-INTERACTING PROTEIN
LLU|FUN_036064-T1RETINITIS PIGMENTOSA GTPASE REGULATOR-INTERACTING PROTEIN
LLU|FUN_036065-T1
LLU|FUN_036066-T1
LLU|FUN_036067-T1
LLU|FUN_036068-T1
LLU|FUN_036069-T1
LLU|FUN_036070-T1
LLU|FUN_036071-T1BETA-1,4-GALACTOSYLTRANSFERASE
LLU|FUN_036072-T1ANKYRIN REPEAT CONTAINING
LLU|FUN_036073-T1
LLU|FUN_036074-T1ER MEMBRANE PROTEIN COMPLEX SUBUNIT 4
LLU|FUN_036075-T1SOMETHING ABOUT SILENCING PROTEIN 10-RELATED
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