About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_035926-T1
LLU|FUN_035927-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_035928-T1
LLU|FUN_035929-T1
LLU|FUN_035930-T1
LLU|FUN_035931-T1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
LLU|FUN_035932-T1RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
LLU|FUN_035933-T1HELICASE
LLU|FUN_035934-T1
LLU|FUN_035935-T1
LLU|FUN_035936-T1
LLU|FUN_035937-T1
LLU|FUN_035938-T1
LLU|FUN_035939-T1TOLL-LIKE RECEPTOR
LLU|FUN_035940-T1
LLU|FUN_035941-T1
LLU|FUN_035942-T1
LLU|FUN_035943-T1
LLU|FUN_035944-T1
LLU|FUN_035945-T139S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL
LLU|FUN_035946-T1
LLU|FUN_035947-T1
LLU|FUN_035948-T1
LLU|FUN_035949-T1SYNAPTOPHYSIN
LLU|FUN_035950-T1RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
LLU|FUN_035951-T1
LLU|FUN_035952-T1DNA2/NAM7 HELICASE FAMILY
LLU|FUN_035953-T1
LLU|FUN_035954-T1
LLU|FUN_035955-T1
LLU|FUN_035956-T1
LLU|FUN_035957-T1
LLU|FUN_035958-T1
LLU|FUN_035959-T1
LLU|FUN_035960-T1SET DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_035961-T1
LLU|FUN_035962-T1
LLU|FUN_035963-T1
LLU|FUN_035964-T1
LLU|FUN_035965-T1
LLU|FUN_035966-T1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 42
LLU|FUN_035967-T1ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATED
LLU|FUN_035968-T1METALLOPEPTIDASE M28 FAMILY MEMBER
LLU|FUN_035969-T1
LLU|FUN_035970-T1
LLU|FUN_035971-T1TGF-BETA FAMILY
LLU|FUN_035972-T1
LLU|FUN_035973-T1
LLU|FUN_035974-T1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
LLU|FUN_035975-T1
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