About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_035675-T1
LLU|FUN_035676-T1DNA POLYMERASE ETA
LLU|FUN_035677-T1
LLU|FUN_035678-T1
LLU|FUN_035679-T1
LLU|FUN_035680-T1GUANINE NUCLEOTIDE EXCHANGE FACTOR
LLU|FUN_035681-T1
LLU|FUN_035682-T1
LLU|FUN_035683-T1RHO GTPASE ACTIVATING PROTEIN 11A
LLU|FUN_035684-T1ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY
LLU|FUN_035685-T1DNA-DIRECTED RNA POLYMERASE
LLU|FUN_035686-T1
LLU|FUN_035687-T1
LLU|FUN_035688-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
LLU|FUN_035689-T1
LLU|FUN_035690-T1
LLU|FUN_035691-T1
LLU|FUN_035692-T1
LLU|FUN_035693-T1FIBROIN HEAVY CHAIN FIB-H LIKE PROTEIN
LLU|FUN_035694-T1
LLU|FUN_035695-T1HILLARIN
LLU|FUN_035696-T1HILLARIN
LLU|FUN_035697-T1CABIT DOMAIN-CONTAINING PROTEIN
LLU|FUN_035698-T1
LLU|FUN_035699-T1RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
LLU|FUN_035700-T1
LLU|FUN_035701-T1HILLARIN
LLU|FUN_035702-T1XANTHINE DEHYDROGENASE
LLU|FUN_035703-T1XANTHINE DEHYDROGENASE
LLU|FUN_035704-T1XANTHINE DEHYDROGENASE
LLU|FUN_035705-T1
LLU|FUN_035706-T1
LLU|FUN_035707-T1XANTHINE DEHYDROGENASE
LLU|FUN_035708-T1
LLU|FUN_035709-T1XANTHINE DEHYDROGENASE
LLU|FUN_035710-T1
LLU|FUN_035711-T1
LLU|FUN_035712-T1
LLU|FUN_035713-T1
LLU|FUN_035714-T1
LLU|FUN_035715-T1
LLU|FUN_035716-T1
LLU|FUN_035717-T1
LLU|FUN_035718-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_035719-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
LLU|FUN_035720-T1
LLU|FUN_035721-T1
LLU|FUN_035722-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_035723-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_035724-T1SI:CH211-201H21.5-RELATED
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