About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_035525-T1
LLU|FUN_035526-T1
LLU|FUN_035527-T1IMPORTIN BETA
LLU|FUN_035528-T1WD40 REPEAT PROTEIN 12, 37
LLU|FUN_035529-T1GLYCOSYLTRANSFERASE 14 FAMILY MEMBER
LLU|FUN_035530-T1LEUCINE RICH REPEAT PROTEIN
LLU|FUN_035531-T1RAN GTPASE-ACTIVATING PROTEIN 1
LLU|FUN_035532-T1
LLU|FUN_035533-T1MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE
LLU|FUN_035534-T1
LLU|FUN_035535-T1SI:CH211-262H13.3-RELATED-RELATED
LLU|FUN_035536-T1
LLU|FUN_035537-T1
LLU|FUN_035538-T1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
LLU|FUN_035539-T1
LLU|FUN_035540-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_035541-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 2A
LLU|FUN_035542-T1BRCA2-INTERACTING TRANSCRIPTIONAL REPRESSOR EMSY
LLU|FUN_035543-T1
LLU|FUN_035544-T1GLYCOPROTEIN HORMONE RECEPTOR
LLU|FUN_035545-T1
LLU|FUN_035546-T1
LLU|FUN_035547-T1THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9
LLU|FUN_035548-T1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION, SUBUNIT 18
LLU|FUN_035549-T1
LLU|FUN_035550-T1
LLU|FUN_035551-T1
LLU|FUN_035552-T1
LLU|FUN_035553-T1
LLU|FUN_035554-T1
LLU|FUN_035555-T1
LLU|FUN_035556-T1
LLU|FUN_035557-T1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
LLU|FUN_035558-T1
LLU|FUN_035559-T1UNCHARACTERIZED
LLU|FUN_035560-T1
LLU|FUN_035561-T1ASPARTYL AMINOPEPTIDASE
LLU|FUN_035562-T1VACUOLAR CALCIUM ION TRANSPORTER
LLU|FUN_035563-T1SERINE-THREONINE PROTEIN KINASE
LLU|FUN_035564-T1
LLU|FUN_035565-T1UNCHARACTERIZED
LLU|FUN_035566-T1
LLU|FUN_035567-T1GAMMA-GLUTAMYLPUTRESCINE SYNTHETASE
LLU|FUN_035568-T1GABA-B RECEPTOR
LLU|FUN_035569-T1GABA-B RECEPTOR
LLU|FUN_035570-T1
LLU|FUN_035571-T1GABA-B RECEPTOR
LLU|FUN_035572-T1GABA-B RECEPTOR
LLU|FUN_035573-T1GABA-B RECEPTOR
LLU|FUN_035574-T1GABA-B RECEPTOR
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