About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_035825-T1
LLU|FUN_035826-T1HILLARIN
LLU|FUN_035827-T1
LLU|FUN_035828-T1GLYCO_TRANS_2-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_035829-T1GLYCO_TRANS_2-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_035830-T1
LLU|FUN_035831-T1
LLU|FUN_035832-T1
LLU|FUN_035833-T1
LLU|FUN_035834-T1
LLU|FUN_035835-T1
LLU|FUN_035836-T1
LLU|FUN_035837-T1
LLU|FUN_035838-T1
LLU|FUN_035839-T1HEAT SHOCK TRANSCRIPTION FACTOR
LLU|FUN_035840-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 24
LLU|FUN_035841-T1
LLU|FUN_035842-T1PIKACHURIN-LIKE PROTEIN
LLU|FUN_035843-T1-
LLU|FUN_035844-T1UBIQUITIN-PROTEIN LIGASE E3C
LLU|FUN_035845-T1
LLU|FUN_035846-T1HIGH MOBILITY GROUP PROTEIN 2
LLU|FUN_035847-T1
LLU|FUN_035848-T1
LLU|FUN_035849-T1
LLU|FUN_035850-T1COMPONENT OF OLIGOMERIC GOLGI COMPLEX 6
LLU|FUN_035851-T1UNCHARACTERIZED
LLU|FUN_035852-T1UNCHARACTERIZED
LLU|FUN_035853-T1UNCHARACTERIZED
LLU|FUN_035854-T1
LLU|FUN_035855-T1UNCHARACTERIZED
LLU|FUN_035856-T1UNCHARACTERIZED
LLU|FUN_035857-T1
LLU|FUN_035858-T1
LLU|FUN_035859-T1
LLU|FUN_035860-T1
LLU|FUN_035861-T1
LLU|FUN_035862-T1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_035863-T1LD35087P
LLU|FUN_035864-T1
LLU|FUN_035865-T1
LLU|FUN_035866-T1OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
LLU|FUN_035867-T1MITOGEN-ACTIVATED PROTEIN KINASE
LLU|FUN_035868-T1ANKYRIN REPEAT FAMILY PROTEIN
LLU|FUN_035869-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
LLU|FUN_035870-T1
LLU|FUN_035871-T1NHL REPEAT-CONTAINING PROTEIN-RELATED
LLU|FUN_035872-T1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
LLU|FUN_035873-T1MUCIN 4-RELATED
LLU|FUN_035874-T1
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