About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_035875-T1PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE
LLU|FUN_035876-T1
LLU|FUN_035877-T1PROTEIN SIDEKICK
LLU|FUN_035878-T1
LLU|FUN_035879-T1
LLU|FUN_035880-T1
LLU|FUN_035881-T1
LLU|FUN_035882-T1FRIZZLED
LLU|FUN_035883-T1PROTEASE M1 ZINC METALLOPROTEASE
LLU|FUN_035884-T1
LLU|FUN_035885-T1
LLU|FUN_035887-T1GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING
LLU|FUN_035888-T1
LLU|FUN_035889-T1
LLU|FUN_035890-T1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
LLU|FUN_035891-T1
LLU|FUN_035892-T1
LLU|FUN_035893-T1
LLU|FUN_035894-T1
LLU|FUN_035895-T1
LLU|FUN_035896-T1
LLU|FUN_035897-T1MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
LLU|FUN_035898-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 162
LLU|FUN_035899-T1HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
LLU|FUN_035900-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 162
LLU|FUN_035901-T1-
LLU|FUN_035902-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 162
LLU|FUN_035903-T1
LLU|FUN_035904-T1
LLU|FUN_035905-T1
LLU|FUN_035906-T1GUANYLATE KINASE-RELATED
LLU|FUN_035907-T1MITOCHONDRIAL RIBOSOMAL PROTEIN S33
LLU|FUN_035908-T1DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED
LLU|FUN_035909-T1SHISA
LLU|FUN_035910-T1DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
LLU|FUN_035911-T1
LLU|FUN_035912-T1DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
LLU|FUN_035913-T1
LLU|FUN_035914-T1
LLU|FUN_035915-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_035916-T1
LLU|FUN_035917-T1
LLU|FUN_035918-T1
LLU|FUN_035919-T1
LLU|FUN_035920-T1
LLU|FUN_035921-T1
LLU|FUN_035922-T1
LLU|FUN_035923-T1
LLU|FUN_035924-T1
LLU|FUN_035925-T1CRUMBS FAMILY MEMBER
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