About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_035775-T1
LLU|FUN_035776-T1XK-RELATED PROTEIN
LLU|FUN_035777-T1
LLU|FUN_035778-T1
LLU|FUN_035779-T1
LLU|FUN_035780-T1RIBOSOMAL PROTEIN L30
LLU|FUN_035781-T1
LLU|FUN_035782-T1PROMININ PROM PROTEIN
LLU|FUN_035783-T1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 69
LLU|FUN_035784-T1INTERFERON REGULATORY FACTOR
LLU|FUN_035785-T1
LLU|FUN_035786-T1
LLU|FUN_035787-T1
LLU|FUN_035788-T1
LLU|FUN_035789-T1
LLU|FUN_035790-T1NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12
LLU|FUN_035791-T1
LLU|FUN_035792-T1
LLU|FUN_035793-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_035794-T1
LLU|FUN_035795-T1
LLU|FUN_035796-T1
LLU|FUN_035797-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_035798-T1CALCIUM BINDING PROTEINS
LLU|FUN_035799-T1
LLU|FUN_035800-T1
LLU|FUN_035801-T1
LLU|FUN_035802-T1
LLU|FUN_035803-T1
LLU|FUN_035804-T1
LLU|FUN_035805-T1
LLU|FUN_035806-T1
LLU|FUN_035807-T1
LLU|FUN_035808-T1
LLU|FUN_035809-T1
LLU|FUN_035810-T1LD33804P
LLU|FUN_035811-T1
LLU|FUN_035812-T1
LLU|FUN_035813-T1ENOLASE SUPERFAMILY, MANDELATE RACEMASE
LLU|FUN_035814-T1CDK5 AND ABL1 ENZYME SUBSTRATE 1
LLU|FUN_035815-T1E3 UBIQUITIN-PROTEIN LIGASE MIB2
LLU|FUN_035816-T1
LLU|FUN_035817-T1E3 UBIQUITIN-PROTEIN LIGASE MIB2
LLU|FUN_035818-T1
LLU|FUN_035819-T1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
LLU|FUN_035820-T1
LLU|FUN_035821-T1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
LLU|FUN_035822-T1PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN
LLU|FUN_035823-T1
LLU|FUN_035824-T1
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