About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_035976-T1MITOGEN-ACTIVATED PROTEIN KINASE
LLU|FUN_035977-T1
LLU|FUN_035978-T1PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1
LLU|FUN_035979-T1PROTEIN ARGININE N-METHYLTRANSFERASE
LLU|FUN_035980-T1PNAS-3 RELATED
LLU|FUN_035981-T1IRON-SULFUR CLUSTER ASSEMBLY PROTEIN
LLU|FUN_035982-T1PROTEIN PET100 HOMOLOG, MITOCHONDRIAL
LLU|FUN_035983-T1
LLU|FUN_035984-T1
LLU|FUN_035985-T1
LLU|FUN_035986-T1
LLU|FUN_035987-T1
LLU|FUN_035988-T1NUCLEAR PORE GLYCOPROTEIN P62-RELATED
LLU|FUN_035989-T1OPIOID GROWTH FACTOR RECEPTOR OGFR ZETA-TYPE OPIOID RECEPTOR
LLU|FUN_035990-T1OPIOID GROWTH FACTOR RECEPTOR OGFR ZETA-TYPE OPIOID RECEPTOR
LLU|FUN_035991-T1EPM2A-INTERACTING PROTEIN 1
LLU|FUN_035992-T1
LLU|FUN_035993-T1SYNAPTIC VESICLE GLYCOPROTEIN 2
LLU|FUN_035994-T1
LLU|FUN_035995-T1
LLU|FUN_035996-T1
LLU|FUN_035997-T1
LLU|FUN_035998-T1SPERM-SPECIFIC FAMILY, CLASS Q
LLU|FUN_035999-T1WD REPEAT DOMAIN 60
LLU|FUN_036000-T1WD REPEAT DOMAIN 60
LLU|FUN_036001-T1SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
LLU|FUN_036002-T1
LLU|FUN_036003-T1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
LLU|FUN_036004-T1
LLU|FUN_036005-T1
LLU|FUN_036006-T1
LLU|FUN_036007-T1
LLU|FUN_036008-T1
LLU|FUN_036009-T1
LLU|FUN_036010-T1UNCHARACTERIZED
LLU|FUN_036011-T1
LLU|FUN_036012-T1
LLU|FUN_036013-T1
LLU|FUN_036014-T1MUCIN 4-RELATED
LLU|FUN_036015-T1PERIOSTIN-RELATED
LLU|FUN_036016-T1
LLU|FUN_036017-T1
LLU|FUN_036018-T1JITTERBUG, ISOFORM N
LLU|FUN_036019-T1
LLU|FUN_036020-T1ACYL-COA DEHYDROGENASE
LLU|FUN_036021-T1EXPRESSED PROTEIN
LLU|FUN_036022-T1UNCHARACTERIZED
LLU|FUN_036023-T1
LLU|FUN_036024-T1
LLU|FUN_036025-T1IMPORTIN BETA
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