About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_036126-T1
LLU|FUN_036127-T1
LLU|FUN_036128-T1
LLU|FUN_036129-T1IRE1-RELATED
LLU|FUN_036130-T1TOLL-LIKE RECEPTOR
LLU|FUN_036131-T1LEUCINE RICH REPEAT PROTEIN
LLU|FUN_036132-T1
LLU|FUN_036133-T1FLAP ENDONUCLEASE FAMILY MEMBER
LLU|FUN_036134-T1HISTONE H1
LLU|FUN_036135-T1MUCIN-17
LLU|FUN_036136-T1
LLU|FUN_036137-T1HISTONE H1
LLU|FUN_036138-T1ATP-DEPENDENT RNA HELICASE RHLE-RELATED
LLU|FUN_036139-T1SERINE/THREONINE-PROTEIN KINASE
LLU|FUN_036140-T1
LLU|FUN_036141-T1
LLU|FUN_036142-T1SERINE/THREONINE-PROTEIN KINASE
LLU|FUN_036143-T1
LLU|FUN_036144-T1
LLU|FUN_036145-T1
LLU|FUN_036146-T1
LLU|FUN_036147-T1
LLU|FUN_036148-T1
LLU|FUN_036149-T1
LLU|FUN_036150-T1C-TYPE LECTIN DOMAIN FAMILY 20 MEMBER A-RELATED
LLU|FUN_036151-T1UNCHARACTERIZED
LLU|FUN_036152-T1CYCLIC-AMP RESPONSE ELEMENT BINDING PROTEIN
LLU|FUN_036153-T1TRANSCRIPTION INTERMEDIARY FACTOR
LLU|FUN_036154-T1TRANSCRIPTION INTERMEDIARY FACTOR
LLU|FUN_036155-T1
LLU|FUN_036156-T1
LLU|FUN_036157-T1
LLU|FUN_036158-T1CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3
LLU|FUN_036159-T1ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL
LLU|FUN_036160-T1
LLU|FUN_036161-T1JUXTAPOSED WITH ANOTHER ZINC FINGER PROTEIN 1
LLU|FUN_036162-T1
LLU|FUN_036163-T1
LLU|FUN_036164-T1
LLU|FUN_036165-T1
LLU|FUN_036166-T126 PROTEASOME COMPLEX SUBUNIT DSS1
LLU|FUN_036167-T1
LLU|FUN_036168-T1
LLU|FUN_036169-T1
LLU|FUN_036170-T1
LLU|FUN_036171-T1
LLU|FUN_036172-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_036173-T1
LLU|FUN_036174-T1
LLU|FUN_036175-T1
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