About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_036076-T1
LLU|FUN_036077-T1
LLU|FUN_036078-T1-
LLU|FUN_036079-T1SSM4 PROTEIN
LLU|FUN_036080-T1
LLU|FUN_036081-T1
LLU|FUN_036082-T1
LLU|FUN_036083-T1
LLU|FUN_036084-T1
LLU|FUN_036085-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
LLU|FUN_036086-T1
LLU|FUN_036087-T1
LLU|FUN_036088-T1
LLU|FUN_036089-T1
LLU|FUN_036090-T1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
LLU|FUN_036091-T1OVOCHYMASE-RELATED
LLU|FUN_036092-T1ACROSIN-RELATED
LLU|FUN_036093-T1GUANINE NUCLEOTIDE EXCHANGE FACTOR
LLU|FUN_036094-T1
LLU|FUN_036095-T1
LLU|FUN_036096-T1DEOXYNUCLEOSIDE KINASE
LLU|FUN_036097-T1PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED
LLU|FUN_036098-T1FORKHEAD-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED
LLU|FUN_036099-T1
LLU|FUN_036100-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_036101-T1LP06937P
LLU|FUN_036102-T1
LLU|FUN_036103-T1
LLU|FUN_036104-T1TOLL-LIKE RECEPTOR
LLU|FUN_036105-T1
LLU|FUN_036106-T1
LLU|FUN_036107-T1PDF RECEPTOR-LIKE PROTEIN-RELATED
LLU|FUN_036108-T1
LLU|FUN_036109-T1
LLU|FUN_036110-T1
LLU|FUN_036111-T1CRUMBS FAMILY MEMBER
LLU|FUN_036112-T1
LLU|FUN_036113-T1PROTEIN BARK BEETLE
LLU|FUN_036114-T1
LLU|FUN_036115-T1
LLU|FUN_036116-T1
LLU|FUN_036117-T1
LLU|FUN_036118-T1S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
LLU|FUN_036119-T1
LLU|FUN_036120-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_036121-T1
LLU|FUN_036122-T1
LLU|FUN_036123-T1
LLU|FUN_036124-T1HISTIDINE TRIAD HIT PROTEIN MEMBER
LLU|FUN_036125-T1
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