About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_036733-T1
LLU|FUN_036734-T1PROTEIN ARGININE N-METHYLTRANSFERASE
LLU|FUN_036735-T1BTB/POZ DOMAIN-CONTAINING
LLU|FUN_036736-T1CADHERIN-23
LLU|FUN_036737-T1FAT ATYPICAL CADHERIN-RELATED
LLU|FUN_036738-T1
LLU|FUN_036739-T1CADHERIN-23
LLU|FUN_036741-T1NINJURIN-RELATED
LLU|FUN_036742-T1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
LLU|FUN_036743-T1SETA BINDING PROTEIN 1
LLU|FUN_036744-T1
LLU|FUN_036745-T1
LLU|FUN_036746-T1
LLU|FUN_036747-T1AQUAPORIN TRANSPORTER
LLU|FUN_036748-T1AQUAPORIN TRANSPORTER
LLU|FUN_036749-T1
LLU|FUN_036750-T1MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED
LLU|FUN_036751-T1
LLU|FUN_036752-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_036753-T1
LLU|FUN_036754-T1POLYCYSTIN FAMILY MEMBER
LLU|FUN_036755-T1POLYCYSTIN FAMILY MEMBER
LLU|FUN_036756-T1POLYCYSTIN FAMILY MEMBER
LLU|FUN_036757-T1
LLU|FUN_036758-T1POLYCYSTIN-1
LLU|FUN_036759-T1SYNAPTOTAGMIN
LLU|FUN_036760-T1
LLU|FUN_036761-T1
LLU|FUN_036762-T1
LLU|FUN_036763-T1
LLU|FUN_036764-T1
LLU|FUN_036765-T1
LLU|FUN_036766-T1
LLU|FUN_036767-T1EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1
LLU|FUN_036768-T1
LLU|FUN_036769-T1
LLU|FUN_036770-T1
LLU|FUN_036771-T1
LLU|FUN_036772-T1
LLU|FUN_036773-T1
LLU|FUN_036774-T1
LLU|FUN_036775-T1GLUTATHIONE S-TRANSFERASE
LLU|FUN_036776-T1
LLU|FUN_036777-T1ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 8
LLU|FUN_036778-T1NUDIX T16 FAMILY MEMBER
LLU|FUN_036779-T1SULFATASE MODIFYING FACTOR 1, 2
LLU|FUN_036780-T1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR AT 64C, ISOFORM A
LLU|FUN_036781-T1CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED
LLU|FUN_036782-T1POLYCYSTIN FAMILY MEMBER
LLU|FUN_036783-T1POLYCYSTIN FAMILY MEMBER
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