About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_036884-T1
LLU|FUN_036885-T1G BETA-LIKE PROTEIN GBL
LLU|FUN_036886-T1NITRATE, FORMATE, IRON DEHYDROGENASE
LLU|FUN_036887-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_036888-T1
LLU|FUN_036889-T1ENVOPLAKIN
LLU|FUN_036890-T1IMMUNOGLOBULIN
LLU|FUN_036891-T1SOLUTE CARRIER FAMILY 17
LLU|FUN_036892-T1
LLU|FUN_036893-T1
LLU|FUN_036894-T1
LLU|FUN_036895-T1
LLU|FUN_036896-T1
LLU|FUN_036897-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_036898-T1ZGC:162816-RELATED
LLU|FUN_036899-T1ISLET CELL AUTOANTIGEN 1
LLU|FUN_036900-T1BONUS, ISOFORM C-RELATED
LLU|FUN_036901-T1ISLET CELL AUTOANTIGEN 1
LLU|FUN_036902-T1UNCHARACTERIZED
LLU|FUN_036903-T1
LLU|FUN_036904-T1UBIQUITIN-ACTIVATING ENZYME E1
LLU|FUN_036905-T1UBIQUITIN-CONJUGATING ENZYME E2
LLU|FUN_036906-T1POTASSIUM/PROTON ANTIPORTER-RELATED
LLU|FUN_036907-T1
LLU|FUN_036908-T1
LLU|FUN_036909-T1
LLU|FUN_036910-T1POTASSIUM/PROTON ANTIPORTER-RELATED
LLU|FUN_036911-T1TSC22
LLU|FUN_036912-T1TSC22 DOMAIN FAMILY PROTEIN 1
LLU|FUN_036913-T1
LLU|FUN_036914-T1
LLU|FUN_036915-T1
LLU|FUN_036916-T1
LLU|FUN_036917-T1
LLU|FUN_036918-T1LEUCINE RICH REPEAT FAMILY PROTEIN
LLU|FUN_036919-T1
LLU|FUN_036920-T1DISCS LARGE
LLU|FUN_036921-T1
LLU|FUN_036922-T1
LLU|FUN_036923-T1
LLU|FUN_036924-T1ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
LLU|FUN_036925-T1ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
LLU|FUN_036926-T1
LLU|FUN_036927-T1ARYLSULFATASE
LLU|FUN_036928-T1CALCIUM BINDING PROTEINS
LLU|FUN_036929-T160 KDA RIBONUCLEOPROTEIN SSA/RO
LLU|FUN_036930-T160 KDA RIBONUCLEOPROTEIN SSA/RO
LLU|FUN_036931-T160 KDA RIBONUCLEOPROTEIN SSA/RO
LLU|FUN_036932-T1SCD6 PROTEIN-RELATED
LLU|FUN_036933-T1
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