About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_037038-T1
LLU|FUN_037039-T1UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE
LLU|FUN_037040-T1CYCLIN
LLU|FUN_037041-T1
LLU|FUN_037042-T1
LLU|FUN_037043-T1
LLU|FUN_037044-T1
LLU|FUN_037045-T1
LLU|FUN_037046-T1
LLU|FUN_037047-T1GLYCOSYLTRANSFERASE-LIKE 1
LLU|FUN_037048-T1GLYCOSYLTRANSFERASE-LIKE 1
LLU|FUN_037049-T1
LLU|FUN_037050-T1
LLU|FUN_037051-T1
LLU|FUN_037052-T1
LLU|FUN_037053-T1SEPTIN
LLU|FUN_037054-T1IQ DOMAIN-CONTAINING PROTEIN C
LLU|FUN_037055-T1OS10G0105400 PROTEIN
LLU|FUN_037056-T1
LLU|FUN_037057-T1
LLU|FUN_037058-T1
LLU|FUN_037059-T1
LLU|FUN_037060-T1-
LLU|FUN_037061-T1
LLU|FUN_037062-T1SWAP-70 RECOMBINASE
LLU|FUN_037063-T1
LLU|FUN_037064-T1
LLU|FUN_037065-T1
LLU|FUN_037066-T1UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL
LLU|FUN_037067-T1UNCHARACTERIZED
LLU|FUN_037068-T1TRANSCRIPTIONAL REPRESSOR PROTEIN YY
LLU|FUN_037069-T1EXPORTIN 1/5
LLU|FUN_037070-T1
LLU|FUN_037071-T1PEPTIDASE S9 PROLYL OLIGOPEPTIDASE
LLU|FUN_037072-T1
LLU|FUN_037073-T1ZINC FINGER C2HC DOMAIN-CONTAINING PROTEIN 1C
LLU|FUN_037074-T1DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL
LLU|FUN_037075-T1
LLU|FUN_037076-T1DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL
LLU|FUN_037077-T1
LLU|FUN_037078-T1
LLU|FUN_037079-T1
LLU|FUN_037080-T1
LLU|FUN_037081-T1
LLU|FUN_037082-T1
LLU|FUN_037083-T1PROTEIN CBG05131
LLU|FUN_037084-T1
LLU|FUN_037085-T1
LLU|FUN_037086-T1CELL DIVISION PROTEIN KINASE
LLU|FUN_037087-T1
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