About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_022640-T1AQUAPORIN TRANSPORTER
LLU|FUN_022641-T1
LLU|FUN_022642-T1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
LLU|FUN_022643-T1IRE1-RELATED
LLU|FUN_022644-T1
LLU|FUN_022645-T1
LLU|FUN_022646-T1
LLU|FUN_022647-T1U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD
LLU|FUN_022648-T1
LLU|FUN_022649-T1
LLU|FUN_022650-T1ARRESTIN DOMAIN CONTAINING PROTEIN
LLU|FUN_022651-T1GTP-BINDING PROTEIN ALPHA SUBUNIT
LLU|FUN_022652-T1GTP-BINDING PROTEIN ALPHA SUBUNIT
LLU|FUN_022653-T1
LLU|FUN_022654-T1EGALITARIAN, ISOFORM B
LLU|FUN_022655-T1COMPLEX III ASSEMBLY FACTOR LYRM7
LLU|FUN_022656-T1TRANSMEMBRANE PROTEIN 232
LLU|FUN_022657-T1GUANINE DEAMINASE
LLU|FUN_022658-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_022659-T1ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
LLU|FUN_022660-T1ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
LLU|FUN_022661-T1
LLU|FUN_022662-T1
LLU|FUN_022663-T1RAS-RELATED PROTEIN RAB
LLU|FUN_022664-T1RIBULOKINASE
LLU|FUN_022665-T1RAN BINDING PROTEIN
LLU|FUN_022666-T1SIMILAR TO HYPOTHETICAL PROTEIN MGC34837
LLU|FUN_022667-T140S RIBOSOMAL PROTEIN S28
LLU|FUN_022668-T1
LLU|FUN_022669-T1
LLU|FUN_022670-T1NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B
LLU|FUN_022671-T1
LLU|FUN_022672-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_022673-T1E3 UBIQUITIN-PROTEIN LIGASE MIB2
LLU|FUN_022674-T1
LLU|FUN_022675-T1
LLU|FUN_022676-T1
LLU|FUN_022677-T1
LLU|FUN_022678-T1
LLU|FUN_022679-T1
LLU|FUN_022680-T1
LLU|FUN_022681-T1TRANSMEMBRANE 7 SUPERFAMILY MEMBER 3
LLU|FUN_022682-T1ABC TRANSPORTER B FAMILY
LLU|FUN_022683-T1
LLU|FUN_022684-T1
LLU|FUN_022685-T1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
LLU|FUN_022686-T1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
LLU|FUN_022687-T1
LLU|FUN_022688-T1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
LLU|FUN_022689-T1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
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