About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_022540-T1SI:DKEY-31G6.6
LLU|FUN_022541-T1
LLU|FUN_022542-T1SERINE/THREONINE-PROTEIN KINASE 17
LLU|FUN_022543-T1
LLU|FUN_022544-T1TRANSMEMBRANE PROTEIN
LLU|FUN_022545-T1
LLU|FUN_022546-T1
LLU|FUN_022547-T1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
LLU|FUN_022548-T1DELTEX-RELATED
LLU|FUN_022549-T1
LLU|FUN_022550-T1
LLU|FUN_022551-T1DELTEX-RELATED
LLU|FUN_022552-T1RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
LLU|FUN_022553-T1HISTONE-LYSINE N-METHYLTRANSFERASE E(Z)
LLU|FUN_022554-T1UBIQUITIN-CONJUGATING ENZYME E2
LLU|FUN_022555-T1SUGAR-1-PHOSPHATE GUANYL TRANSFERASE
LLU|FUN_022556-T1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
LLU|FUN_022557-T1
LLU|FUN_022558-T1
LLU|FUN_022559-T1
LLU|FUN_022560-T1
LLU|FUN_022561-T1
LLU|FUN_022562-T1
LLU|FUN_022563-T1
LLU|FUN_022564-T1
LLU|FUN_022565-T1
LLU|FUN_022566-T1SOLUTE CARRIER FAMILY 5
LLU|FUN_022567-T1
LLU|FUN_022568-T1
LLU|FUN_022569-T1
LLU|FUN_022570-T1
LLU|FUN_022571-T1ZINC FINGER PROTEIN
LLU|FUN_022572-T1DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19
LLU|FUN_022573-T1UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED
LLU|FUN_022574-T1PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_022575-T1
LLU|FUN_022576-T1
LLU|FUN_022577-T1
LLU|FUN_022578-T1IONOTROPIC GLUTAMATE RECEPTOR
LLU|FUN_022579-T1
LLU|FUN_022580-T1
LLU|FUN_022581-T1
LLU|FUN_022582-T1IONOTROPIC GLUTAMATE RECEPTOR
LLU|FUN_022583-T1
LLU|FUN_022584-T1GABA-B RECEPTOR
LLU|FUN_022585-T1SOLUTE CARRIER FAMILY 17
LLU|FUN_022586-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_022587-T1
LLU|FUN_022588-T1ANTIGEN KI-67-LIKE PROTEIN
LLU|FUN_022589-T1INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE
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