About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_022290-T1HEN1
LLU|FUN_022291-T1AKNA DOMAIN-CONTAINING PROTEIN
LLU|FUN_022292-T1PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED
LLU|FUN_022293-T1
LLU|FUN_022294-T1PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED
LLU|FUN_022295-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_022296-T1
LLU|FUN_022297-T1
LLU|FUN_022298-T1DNA REPAIR PROTEIN SWI5 HOMOLOG
LLU|FUN_022299-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 151
LLU|FUN_022300-T1
LLU|FUN_022301-T1
LLU|FUN_022302-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 151
LLU|FUN_022303-T1ATF6, ISOFORM C
LLU|FUN_022304-T1
LLU|FUN_022305-T1
LLU|FUN_022306-T1PRESEQUENCE PROTEASE
LLU|FUN_022307-T1TFIIH, POLYPEPTIDE 4
LLU|FUN_022308-T1VALYL-TRNA SYNTHETASES
LLU|FUN_022309-T1
LLU|FUN_022310-T1
LLU|FUN_022311-T1GOLGI SNARE BET1-RELATED
LLU|FUN_022312-T1RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN
LLU|FUN_022313-T1
LLU|FUN_022314-T1ECDYSONE-INDUCIBLE GENE E1, ISOFORM A
LLU|FUN_022315-T1
LLU|FUN_022316-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_022317-T1ACYL-COA DEHYDROGENASE
LLU|FUN_022318-T1
LLU|FUN_022319-T1
LLU|FUN_022320-T1RING-TYPE DOMAIN-CONTAINING PROTEIN
LLU|FUN_022321-T1SACCHAROPINE DEHYDROGENASE
LLU|FUN_022322-T1AMINOMETHYLTRANSFERASE
LLU|FUN_022323-T1
LLU|FUN_022324-T1
LLU|FUN_022325-T1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
LLU|FUN_022326-T1
LLU|FUN_022327-T1
LLU|FUN_022328-T1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
LLU|FUN_022329-T1
LLU|FUN_022330-T1CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED
LLU|FUN_022331-T1VACUOLAR MEMBRANE PROTEIN YPL162C
LLU|FUN_022332-T1
LLU|FUN_022333-T1POLYCOMB GROUP PROTEIN
LLU|FUN_022334-T1UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER
LLU|FUN_022335-T1
LLU|FUN_022336-T1
LLU|FUN_022337-T1
LLU|FUN_022338-T1PLASMINOGEN-RELATED
LLU|FUN_022339-T1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
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