About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_022340-T1TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
LLU|FUN_022341-T1MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN
LLU|FUN_022342-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_022343-T1CYSTEINE-RICH HYDROPHOBIC DOMAIN PROTEIN BRAIN X-LINKED PROTEIN
LLU|FUN_022344-T1
LLU|FUN_022345-T1
LLU|FUN_022346-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_022347-T1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
LLU|FUN_022348-T1
LLU|FUN_022349-T1GLYCINE N-METHYLTRANSFERASE
LLU|FUN_022350-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_022351-T1
LLU|FUN_022352-T1
LLU|FUN_022353-T1
LLU|FUN_022354-T1
LLU|FUN_022355-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
LLU|FUN_022356-T1
LLU|FUN_022357-T1
LLU|FUN_022358-T1
LLU|FUN_022359-T1OS10G0105400 PROTEIN
LLU|FUN_022360-T1
LLU|FUN_022361-T1
LLU|FUN_022362-T1SNAC DOMAIN-CONTAINING PROTEIN
LLU|FUN_022363-T1OS10G0105400 PROTEIN
LLU|FUN_022364-T1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
LLU|FUN_022365-T1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
LLU|FUN_022366-T1
LLU|FUN_022367-T1
LLU|FUN_022368-T1
LLU|FUN_022369-T1P2X PURINOCEPTOR
LLU|FUN_022370-T1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
LLU|FUN_022371-T1HERMANSKY-PUDLAK SYNDROME 4 PROTEIN LIGHT-EAR PROTEIN-RELATED
LLU|FUN_022372-T1
LLU|FUN_022373-T1UNC-13-4A, ISOFORM B
LLU|FUN_022374-T1RUS1 FAMILY PROTEIN C16ORF58
LLU|FUN_022375-T1DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
LLU|FUN_022376-T1
LLU|FUN_022377-T1
LLU|FUN_022378-T1
LLU|FUN_022379-T1
LLU|FUN_022380-T1RUS1 FAMILY PROTEIN C16ORF58
LLU|FUN_022381-T1
LLU|FUN_022382-T1GAMMA GLUTAMYL TRANSPEPTIDASE
LLU|FUN_022383-T1
LLU|FUN_022384-T1GAMMA GLUTAMYL TRANSPEPTIDASE
LLU|FUN_022385-T1
LLU|FUN_022386-T1
LLU|FUN_022387-T1
LLU|FUN_022388-T1MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED
LLU|FUN_022389-T1
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