About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_022490-T1TYROSINE-PROTEIN KINASE RECEPTOR
LLU|FUN_022491-T1
LLU|FUN_022492-T1
LLU|FUN_022493-T1RAW, ISOFORM A
LLU|FUN_022494-T1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 22
LLU|FUN_022495-T1
LLU|FUN_022496-T1RIBOSOMAL PROTEIN L7AE FAMILY MEMBER
LLU|FUN_022497-T1PERSULFIDE DIOXYGENASE ETHE1
LLU|FUN_022498-T1ACROSIN-RELATED
LLU|FUN_022499-T1PERSULFIDE DIOXYGENASE ETHE1
LLU|FUN_022500-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 15
LLU|FUN_022501-T1TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1
LLU|FUN_022502-T1
LLU|FUN_022503-T1
LLU|FUN_022504-T1NFRKB-RELATED
LLU|FUN_022505-T1HEPARAN SULFATE 2-O-SULFOTRANSFERASE
LLU|FUN_022506-T1NUCLEOPORIN NUP188 HOMOLOG
LLU|FUN_022507-T1N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE
LLU|FUN_022508-T1RNA HELICASE
LLU|FUN_022509-T1GALACTOSE-3-O-SULFOTRANSFERASE
LLU|FUN_022510-T1SODIUM-BILE ACID COTRANSPORTER
LLU|FUN_022511-T1
LLU|FUN_022512-T1
LLU|FUN_022513-T1
LLU|FUN_022514-T1SENSOR KINASE-RELATED
LLU|FUN_022515-T1
LLU|FUN_022516-T1
LLU|FUN_022517-T1MUCIN 4-RELATED
LLU|FUN_022518-T1MUCIN 4-RELATED
LLU|FUN_022519-T1
LLU|FUN_022520-T15-HYDROXYTRYPTAMINE RECEPTOR
LLU|FUN_022521-T1
LLU|FUN_022522-T1
LLU|FUN_022523-T1
LLU|FUN_022524-T1
LLU|FUN_022525-T1
LLU|FUN_022526-T1
LLU|FUN_022527-T1
LLU|FUN_022528-T1
LLU|FUN_022529-T1DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7-RELATED
LLU|FUN_022530-T1
LLU|FUN_022531-T1
LLU|FUN_022532-T1
LLU|FUN_022533-T1GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE
LLU|FUN_022534-T15'-NUCLEOTIDASE
LLU|FUN_022535-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 14
LLU|FUN_022536-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
LLU|FUN_022537-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
LLU|FUN_022538-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
LLU|FUN_022539-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
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