Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia luymesi | Annelida | cold seep-dwelling tubeworm Lamellibrachia luymesi | Hydrothermal vent | >540 | the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′) | 238240 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
LLUY_1.0 | ~688Mb | Scaffold | 2019 | SDWI01 | Auburn University | PRJNA516467 | ~95% | 38,998 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesi | BMC Biology | 31739792 |
Gene ID | Description |
---|---|
LLU|FUN_040834-T1 | |
LLU|FUN_040835-T1 | |
LLU|FUN_040836-T1 | LEUCINE AMINOPEPTIDASE-RELATED |
LLU|FUN_040837-T1 | |
LLU|FUN_040838-T1 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
LLU|FUN_040839-T1 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
LLU|FUN_040840-T1 | HEPARAN SULFATE SULFOTRANSFERASE |
LLU|FUN_040841-T1 | HEPARAN SULFATE SULFOTRANSFERASE |
LLU|FUN_040842-T1 | PATCHED-RELATED |
LLU|FUN_040843-T1 | |
LLU|FUN_040844-T1 | |
LLU|FUN_040845-T1 | |
LLU|FUN_040846-T1 | FATTY ACID SYNTHASE |
LLU|FUN_040847-T1 | PATCHED-RELATED |
LLU|FUN_040848-T1 | |
LLU|FUN_040849-T1 | ALPHA-MANNOSIDASE 2C1 |