About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_022240-T1
LLU|FUN_022241-T1SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED
LLU|FUN_022242-T1RECEPTOR FOR ACTIVATED PROTEIN KINASE C RACK1
LLU|FUN_022243-T1
LLU|FUN_022244-T1REGULATOR COMPLEX PROTEIN LAMTOR3
LLU|FUN_022245-T1
LLU|FUN_022246-T1
LLU|FUN_022247-T1
LLU|FUN_022248-T1DOCKING PROTEIN RELATED
LLU|FUN_022249-T1EPITHELIAL MEMBRANE PROTEIN-RELATED
LLU|FUN_022250-T1
LLU|FUN_022251-T1RNA DEMETHYLASE ALKBH5
LLU|FUN_022252-T1NHL REPEAT-CONTAINING PROTEIN-RELATED
LLU|FUN_022253-T1FASCIN
LLU|FUN_022254-T1CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATED
LLU|FUN_022255-T1DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 2
LLU|FUN_022256-T1
LLU|FUN_022257-T1MYOSIN VII, XV
LLU|FUN_022258-T1
LLU|FUN_022259-T1
LLU|FUN_022260-T1
LLU|FUN_022261-T1GLOBIN-LIKE PROTEIN
LLU|FUN_022262-T1
LLU|FUN_022263-T1
LLU|FUN_022264-T1
LLU|FUN_022265-T1
LLU|FUN_022266-T1
LLU|FUN_022267-T1DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED
LLU|FUN_022268-T1
LLU|FUN_022269-T1
LLU|FUN_022270-T1SOLUTE CARRIER FAMILY 13 MEMBER
LLU|FUN_022271-T1SOLUTE CARRIER FAMILY 13 MEMBER
LLU|FUN_022272-T1
LLU|FUN_022273-T1
LLU|FUN_022274-T1
LLU|FUN_022275-T1AGAP008228-PA
LLU|FUN_022276-T1
LLU|FUN_022277-T1
LLU|FUN_022278-T1
LLU|FUN_022279-T1
LLU|FUN_022280-T1ZINC FINGER PROTEIN
LLU|FUN_022281-T1
LLU|FUN_022282-T1UNCHARACTERIZED
LLU|FUN_022283-T1PROTEIN SEL-1 HOMOLOG 3
LLU|FUN_022284-T1
LLU|FUN_022285-T1
LLU|FUN_022286-T1
LLU|FUN_022287-T1EGF-LIKE-DOMAIN, MULTIPLE 7, 8
LLU|FUN_022288-T1
LLU|FUN_022289-T1
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