About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_022034-T1PX DOMAIN-CONTAINING PROTEIN
LLU|FUN_022035-T1MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7
LLU|FUN_022036-T1
LLU|FUN_022037-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 154
LLU|FUN_022038-T1
LLU|FUN_022039-T1
LLU|FUN_022040-T1MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD1 MITOTIC ARREST DEFICIENT-LIKE PROTEIN 1
LLU|FUN_022041-T1MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD1 MITOTIC ARREST DEFICIENT-LIKE PROTEIN 1
LLU|FUN_022042-T1ACTIVATING TRANSCRIPTION FACTOR 7 INTERACTING PROTEIN
LLU|FUN_022043-T1
LLU|FUN_022044-T1GLUTAMATE-RICH WD REPEAT-CONTAINING PROTEIN 1
LLU|FUN_022045-T1BRAIN PROTEIN I3
LLU|FUN_022046-T1HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
LLU|FUN_022047-T1
LLU|FUN_022048-T1
LLU|FUN_022049-T1
LLU|FUN_022050-T1
LLU|FUN_022051-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
LLU|FUN_022052-T1-
LLU|FUN_022053-T1AMINOACYL TRNA SYNTHASE COMPLEX-INTERACTING MULTIFUNCTIONAL PROTEIN
LLU|FUN_022054-T1UBIQUITINATION FACTOR E4
LLU|FUN_022055-T1UNCHARACTERIZED
LLU|FUN_022056-T1COLLAGEN ALPHA
LLU|FUN_022057-T1DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
LLU|FUN_022058-T1MUCIN 4-RELATED
LLU|FUN_022059-T1
LLU|FUN_022060-T1
LLU|FUN_022061-T1CRUMBS FAMILY MEMBER
LLU|FUN_022062-T1
LLU|FUN_022063-T1
LLU|FUN_022064-T1
LLU|FUN_022065-T1
LLU|FUN_022066-T1DYNACTIN 1-RELATED MICROTUBULE-BINDING
LLU|FUN_022067-T1
LLU|FUN_022068-T1
LLU|FUN_022069-T1PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_5G03330)-RELATED
LLU|FUN_022070-T1
LLU|FUN_022071-T1
LLU|FUN_022072-T1UNCHARACTERIZED
LLU|FUN_022073-T1LEUCOKININ RECEPTOR-RELATED
LLU|FUN_022074-T1
LLU|FUN_022075-T1
LLU|FUN_022076-T1BAP28
LLU|FUN_022077-T1RETICULOCALBIN
LLU|FUN_022078-T1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
LLU|FUN_022079-T1PAX6 NEIGHBOR PROTEIN PAXNEB
LLU|FUN_022080-T1F-BOX ONLY PROTEIN 47
LLU|FUN_022081-T1F-BOX ONLY PROTEIN 47
LLU|FUN_022082-T1SERINE/THREONINE-PROTEIN KINASE
LLU|FUN_022083-T1
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