About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_021833-T1B-CELL RECEPTOR CD22
LLU|FUN_021834-T1
LLU|FUN_021835-T1CHYMOTRYPSIN-RELATED
LLU|FUN_021836-T1ADIPOR/PROGESTIN RECEPTOR-RELATED
LLU|FUN_021837-T1FOLATE RECEPTOR
LLU|FUN_021838-T1
LLU|FUN_021839-T1CRUMBS FAMILY MEMBER
LLU|FUN_021840-T1
LLU|FUN_021841-T1MOLYBDOPTERIN COFACTOR SYNTHESIS PROTEIN A
LLU|FUN_021842-T1-
LLU|FUN_021843-T1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 70
LLU|FUN_021844-T1D-TYROSYL-TRNA TYR DEACYLASE
LLU|FUN_021845-T1
LLU|FUN_021846-T1OPSIN
LLU|FUN_021847-T1SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
LLU|FUN_021848-T1
LLU|FUN_021849-T1EH DOMAIN
LLU|FUN_021850-T1PROTEIN YIPPEE-LIKE CG15309-RELATED
LLU|FUN_021851-T1FI17866P1
LLU|FUN_021852-T1TETRATRICOPEPTIDE-LIKE HELICAL
LLU|FUN_021853-T1
LLU|FUN_021854-T1GUANYLYL CYCLASE
LLU|FUN_021855-T1
LLU|FUN_021856-T1GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN PFC0235W
LLU|FUN_021857-T1
LLU|FUN_021858-T1ARRESTIN DOMAIN-CONTAINING PROTEIN D
LLU|FUN_021859-T1KELCH REPEAT DOMAIN
LLU|FUN_021860-T1DDB1- AND CUL4-ASSOCIATED FACTOR 4-RELATED
LLU|FUN_021861-T1
LLU|FUN_021862-T1
LLU|FUN_021863-T1
LLU|FUN_021864-T1
LLU|FUN_021865-T1
LLU|FUN_021866-T1PLEKHH PROTEIN
LLU|FUN_021867-T1THADA/DEATH RECEPTOR INTERACTING PROTEIN
LLU|FUN_021868-T1
LLU|FUN_021869-T1THADA/DEATH RECEPTOR INTERACTING PROTEIN
LLU|FUN_021870-T1
LLU|FUN_021871-T1
LLU|FUN_021872-T1
LLU|FUN_021873-T1
LLU|FUN_021874-T1
LLU|FUN_021875-T1
LLU|FUN_021876-T1
LLU|FUN_021877-T1CCCH ZINC FINGER/TIS11-RELATED
LLU|FUN_021878-T1PROTEIN CBG16428
LLU|FUN_021879-T1
LLU|FUN_021880-T1GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2
LLU|FUN_021881-T1GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2
LLU|FUN_021882-T1
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