About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_021582-T1METAL DEPENDENT HYDROLASE - RELATED
LLU|FUN_021583-T1OVOCHYMASE-RELATED
LLU|FUN_021584-T1OVOCHYMASE-RELATED
LLU|FUN_021585-T1OVOCHYMASE-RELATED
LLU|FUN_021586-T1ACROSIN-RELATED
LLU|FUN_021587-T1
LLU|FUN_021588-T1METALLOPROTEASE TLDD
LLU|FUN_021589-T1METALLOPHOSPHOESTERASE
LLU|FUN_021590-T1ACROSIN-RELATED
LLU|FUN_021591-T1PIRNA BIOGENESIS PROTEIN EXD1
LLU|FUN_021592-T1
LLU|FUN_021593-T1
LLU|FUN_021594-T1
LLU|FUN_021595-T1
LLU|FUN_021596-T1
LLU|FUN_021597-T1
LLU|FUN_021598-T1
LLU|FUN_021599-T1
LLU|FUN_021600-T1
LLU|FUN_021601-T1
LLU|FUN_021602-T1ACROSIN-RELATED
LLU|FUN_021603-T1ACROSIN-RELATED
LLU|FUN_021604-T1OVOCHYMASE-RELATED
LLU|FUN_021605-T1
LLU|FUN_021606-T1
LLU|FUN_021607-T1OS10G0105400 PROTEIN
LLU|FUN_021608-T1
LLU|FUN_021609-T1BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN
LLU|FUN_021610-T139S RIBOSOMAL PROTEIN L45, MITOCHONDRIAL
LLU|FUN_021611-T1C-TYPE LECTIN DOMAIN FAMILY 20 MEMBER A-RELATED
LLU|FUN_021612-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
LLU|FUN_021613-T1
LLU|FUN_021614-T1
LLU|FUN_021615-T1
LLU|FUN_021616-T1
LLU|FUN_021617-T1
LLU|FUN_021618-T1
LLU|FUN_021619-T1
LLU|FUN_021620-T1SERINE PROTEASE INHIBITOR
LLU|FUN_021621-T1FIBRILLIN-RELATED
LLU|FUN_021622-T1
LLU|FUN_021623-T1
LLU|FUN_021624-T1RING FINGER PROTEIN 141-RELATED
LLU|FUN_021625-T1
LLU|FUN_021626-T1
LLU|FUN_021627-T13-KETOACYL-COA THIOLASE, PEROXISOMAL
LLU|FUN_021628-T1NUCLEAR FRAGILE X MENTAL RETARDATION PROTEIN INTERACTING PROTEIN 1
LLU|FUN_021629-T1
LLU|FUN_021630-T1PROTEIN EVA-1
LLU|FUN_021631-T1
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