About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_021682-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_021683-T1ZINC FINGER PROTEIN
LLU|FUN_021684-T1ZINC FINGER PROTEIN
LLU|FUN_021685-T1
LLU|FUN_021686-T1
LLU|FUN_021687-T1DYNEIN HEAVY CHAIN
LLU|FUN_021688-T1DYNEIN HEAVY CHAIN FAMILY PROTEIN
LLU|FUN_021689-T1DYNEIN HEAVY CHAIN FAMILY PROTEIN
LLU|FUN_021690-T1DYNEIN HEAVY CHAIN FAMILY PROTEIN
LLU|FUN_021691-T1DYNEIN HEAVY CHAIN FAMILY PROTEIN
LLU|FUN_021692-T1PROTEIN EVA-1
LLU|FUN_021693-T1
LLU|FUN_021694-T1PROTEIN EVA-1
LLU|FUN_021695-T1PROTEIN EVA-1
LLU|FUN_021696-T1
LLU|FUN_021697-T1
LLU|FUN_021698-T1
LLU|FUN_021699-T1
LLU|FUN_021700-T1FGF RECEPTOR ACTIVATING PROTEIN 1
LLU|FUN_021701-T1UNCHARACTERIZED
LLU|FUN_021702-T1DEATH EFFECTOR DOMAIN-CONTAINING PROTEIN
LLU|FUN_021703-T1ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100
LLU|FUN_021704-T1UNCHARACTERIZED
LLU|FUN_021705-T1ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED
LLU|FUN_021706-T1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
LLU|FUN_021707-T1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
LLU|FUN_021708-T1
LLU|FUN_021709-T1
LLU|FUN_021710-T1SOLUTE CARRIER FAMILY 13 MEMBER
LLU|FUN_021711-T1
LLU|FUN_021712-T1
LLU|FUN_021713-T1RIBONUCLEASE P SUBUNIT P21
LLU|FUN_021714-T1CENTRIOLAR COILED-COIL PROTEIN OF 110 KDA
LLU|FUN_021715-T1
LLU|FUN_021716-T1
LLU|FUN_021717-T1ATP-BINDING CASSETTE SUB-FAMILY C
LLU|FUN_021718-T1
LLU|FUN_021719-T1UBIQUITIN LIGASE SPECIFICITY FACTOR/HREP PROTEIN
LLU|FUN_021720-T1DYNEIN HEAVY CHAIN
LLU|FUN_021721-T1DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11
LLU|FUN_021722-T1UPF0602 PROTEIN C4ORF47
LLU|FUN_021723-T1FATTY ACID ACYL TRANSFERASE-RELATED
LLU|FUN_021724-T1ENDONUCLEASE IV ENDODEOXYRIBONUCLEASE IV
LLU|FUN_021725-T1DIACYLGLYCEROL LIPASE HOMOLOG-RELATED
LLU|FUN_021726-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_021727-T1RHO GTPASE ACTIVATING PROTEIN AT 15B, ISOFORM C
LLU|FUN_021728-T1
LLU|FUN_021729-T1
LLU|FUN_021730-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
LLU|FUN_021731-T1
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