About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_021532-T1
LLU|FUN_021533-T1
LLU|FUN_021534-T1HMG-BOX TRANSCRIPTION FACTOR BBX
LLU|FUN_021535-T1
LLU|FUN_021536-T1GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
LLU|FUN_021537-T1
LLU|FUN_021538-T1VASCULAR CELL ADHESION MOLECULE 1
LLU|FUN_021539-T1
LLU|FUN_021540-T1
LLU|FUN_021541-T1
LLU|FUN_021542-T1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
LLU|FUN_021543-T1
LLU|FUN_021544-T1
LLU|FUN_021545-T1
LLU|FUN_021546-T1
LLU|FUN_021547-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
LLU|FUN_021548-T1
LLU|FUN_021549-T1
LLU|FUN_021550-T1RE45066P-RELATED
LLU|FUN_021551-T1
LLU|FUN_021552-T1
LLU|FUN_021553-T1DYNAMIN
LLU|FUN_021554-T1
LLU|FUN_021555-T1STEROL DESATURASE-RELATED PROTEIN
LLU|FUN_021556-T1STEROL DESATURASE-RELATED PROTEIN
LLU|FUN_021557-T1STEROL DESATURASE-RELATED PROTEIN
LLU|FUN_021558-T1
LLU|FUN_021559-T1
LLU|FUN_021560-T1AMPHIPHYSIN
LLU|FUN_021561-T126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3
LLU|FUN_021562-T1
LLU|FUN_021563-T1
LLU|FUN_021564-T1NGFI-A BINDING PROTEIN
LLU|FUN_021565-T1SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION
LLU|FUN_021566-T1
LLU|FUN_021567-T1URIDINE PHOSPHORYLASE
LLU|FUN_021568-T1ZINC FINGER PROTEIN
LLU|FUN_021569-T1ZINC FINGER PROTEIN
LLU|FUN_021570-T1DEOXYRIBONUCLEASE
LLU|FUN_021571-T1
LLU|FUN_021572-T1
LLU|FUN_021573-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_021574-T1SOLUTE CARRIER FAMILY 22 MEMBER
LLU|FUN_021575-T1
LLU|FUN_021576-T1
LLU|FUN_021577-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
LLU|FUN_021578-T1
LLU|FUN_021579-T1
LLU|FUN_021580-T1PROTEIN BARK BEETLE
LLU|FUN_021581-T1
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