About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_021783-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_021784-T1
LLU|FUN_021785-T1
LLU|FUN_021786-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_021787-T1L1 TRANSPOSABLE ELEMENT-RELATED
LLU|FUN_021788-T1CULLIN
LLU|FUN_021789-T1DYNEIN HEAVY CHAIN
LLU|FUN_021790-T1
LLU|FUN_021791-T1
LLU|FUN_021792-T1
LLU|FUN_021793-T1ATP-DEPENDENT DNA HELICASE
LLU|FUN_021794-T1
LLU|FUN_021795-T1
LLU|FUN_021796-T1
LLU|FUN_021797-T1
LLU|FUN_021798-T1
LLU|FUN_021799-T1
LLU|FUN_021800-T1
LLU|FUN_021801-T1TRANSMEMBRANE PROTEIN 169
LLU|FUN_021802-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_021803-T1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
LLU|FUN_021804-T1GLYCOSYL HYDROLASE-RELATED
LLU|FUN_021805-T1ZINC FINGER PROTEIN 183
LLU|FUN_021806-T1
LLU|FUN_021807-T1
LLU|FUN_021808-T1
LLU|FUN_021809-T1GLYCOSYL HYDROLASE-RELATED
LLU|FUN_021810-T1GLYCOSYL HYDROLASE-RELATED
LLU|FUN_021811-T1ZINC FINGER PROTEIN 183
LLU|FUN_021812-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
LLU|FUN_021813-T1
LLU|FUN_021814-T1
LLU|FUN_021815-T1GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2
LLU|FUN_021816-T1ABL INTERACTOR FAMILY MEMBER
LLU|FUN_021817-T1
LLU|FUN_021818-T1ANION EXCHANGE PROTEIN
LLU|FUN_021819-T1GEO13458P1
LLU|FUN_021820-T1
LLU|FUN_021821-T1
LLU|FUN_021822-T1POTE ANKYRIN DOMAIN
LLU|FUN_021823-T1YEATS DOMAIN
LLU|FUN_021824-T1
LLU|FUN_021825-T1
LLU|FUN_021826-T1
LLU|FUN_021827-T1
LLU|FUN_021828-T1SOLUTE CARRIER FAMILY 17
LLU|FUN_021829-T1
LLU|FUN_021830-T1
LLU|FUN_021831-T1
LLU|FUN_021832-T1PIRNA BIOGENESIS PROTEIN EXD1
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