About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_022390-T1
LLU|FUN_022391-T1
LLU|FUN_022392-T1
LLU|FUN_022393-T1
LLU|FUN_022394-T1
LLU|FUN_022395-T1SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3
LLU|FUN_022396-T1
LLU|FUN_022397-T1SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
LLU|FUN_022398-T1SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
LLU|FUN_022399-T1
LLU|FUN_022400-T1
LLU|FUN_022401-T1TUDOR DOMAIN CONTAINING PROTEIN
LLU|FUN_022402-T1
LLU|FUN_022403-T1
LLU|FUN_022404-T1UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED
LLU|FUN_022405-T1MYOINOSITOL OXYGENASE
LLU|FUN_022406-T1GLUTAREDOXIN FAMILY MEMBER
LLU|FUN_022407-T1RING ZINC FINGER PROTEIN
LLU|FUN_022408-T1
LLU|FUN_022409-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_022410-T1
LLU|FUN_022411-T1
LLU|FUN_022412-T1
LLU|FUN_022413-T1
LLU|FUN_022414-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_022415-T1
LLU|FUN_022416-T1
LLU|FUN_022417-T1
LLU|FUN_022418-T1
LLU|FUN_022419-T1IFT140/172-RELATED
LLU|FUN_022420-T1
LLU|FUN_022421-T1SCC1 / RAD21 FAMILY MEMBER
LLU|FUN_022422-T1BAX INHIBITOR-RELATED
LLU|FUN_022423-T1ATILLA, ISOFORM B-RELATED-RELATED
LLU|FUN_022424-T1NUCLEAR SEGREGATION PROTEIN BFR1
LLU|FUN_022425-T1PYRROLINE-5-CARBOXYLATE REDUCTASE
LLU|FUN_022426-T1STAR-RELATED LIPID TRANSFER PROTEIN 9
LLU|FUN_022427-T1
LLU|FUN_022428-T1
LLU|FUN_022429-T1
LLU|FUN_022430-T1STAR-RELATED LIPID TRANSFER PROTEIN 9
LLU|FUN_022431-T1
LLU|FUN_022432-T1
LLU|FUN_022433-T1
LLU|FUN_022434-T1
LLU|FUN_022435-T1GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
LLU|FUN_022436-T1GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
LLU|FUN_022437-T1
LLU|FUN_022438-T1
LLU|FUN_022439-T1GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
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