About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_022790-T1
LLU|FUN_022791-T1
LLU|FUN_022792-T1TRANSMEMBRANE PROTEIN 246
LLU|FUN_022793-T1UNCHARACTERIZED
LLU|FUN_022794-T1
LLU|FUN_022795-T1
LLU|FUN_022796-T1
LLU|FUN_022797-T1
LLU|FUN_022798-T1
LLU|FUN_022799-T1
LLU|FUN_022800-T1DUAL SPECIFICITY PROTEIN PHOSPHATASE
LLU|FUN_022801-T1GTP-BINDING PROTEIN-RELATED
LLU|FUN_022802-T1RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED
LLU|FUN_022803-T1RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED
LLU|FUN_022804-T1POLY A POLYMERASE CID PAP -RELATED
LLU|FUN_022805-T1T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
LLU|FUN_022806-T1BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 6
LLU|FUN_022807-T1METALLOPROTEASE TLDD
LLU|FUN_022808-T1
LLU|FUN_022809-T1TENASCIN
LLU|FUN_022810-T1CYTOKINE RECEPTOR
LLU|FUN_022811-T1PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER
LLU|FUN_022812-T1ENDO-ALPHA-1,2-MANNOSIDASE
LLU|FUN_022813-T1RNA PROCESSING PROTEIN LD23810P
LLU|FUN_022814-T1UBIQUITIN LIGASE PROTEIN PHF9 FANCONI ANEMIA GROUP L PROTEIN
LLU|FUN_022815-T1UBIQUITIN LIGASE PROTEIN PHF9 FANCONI ANEMIA GROUP L PROTEIN
LLU|FUN_022816-T1CASEIN KINASE-RELATED
LLU|FUN_022817-T1CASEIN KINASE-RELATED
LLU|FUN_022818-T1
LLU|FUN_022819-T1
LLU|FUN_022820-T1STI2 PROTEIN-RELATED
LLU|FUN_022821-T1
LLU|FUN_022822-T1NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12
LLU|FUN_022823-T1OSJNBA0004B13.7 PROTEIN
LLU|FUN_022824-T1OSJNBA0004B13.7 PROTEIN
LLU|FUN_022825-T1DOLICHYL GLYCOSYLTRANSFERASE
LLU|FUN_022826-T1CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING
LLU|FUN_022827-T1
LLU|FUN_022828-T1
LLU|FUN_022829-T1
LLU|FUN_022830-T1
LLU|FUN_022831-T1
LLU|FUN_022832-T1
LLU|FUN_022833-T1
LLU|FUN_022834-T1
LLU|FUN_022835-T1
LLU|FUN_022836-T1
LLU|FUN_022837-T1
LLU|FUN_022838-T1
LLU|FUN_022839-T1
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