About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_022941-T1ATILLA, ISOFORM B-RELATED-RELATED
LLU|FUN_022942-T1
LLU|FUN_022943-T1CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR
LLU|FUN_022944-T1
LLU|FUN_022945-T1
LLU|FUN_022946-T1EG:EG0003.4 PROTEIN-RELATED
LLU|FUN_022947-T1EG:EG0003.4 PROTEIN-RELATED
LLU|FUN_022948-T1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
LLU|FUN_022949-T1PSEUDOURIDINE SYNTHASE-RELATED
LLU|FUN_022950-T1USP DOMAIN-CONTAINING PROTEIN
LLU|FUN_022951-T1MULTIVESICULAR BODY SUBUNIT 12B
LLU|FUN_022952-T1USP DOMAIN-CONTAINING PROTEIN
LLU|FUN_022957-T1
LLU|FUN_022958-T1
LLU|FUN_022959-T1
LLU|FUN_022960-T1
LLU|FUN_022961-T1
LLU|FUN_022962-T1
LLU|FUN_022963-T1
LLU|FUN_022964-T1FAMILY WITH SEQUENCE SIMILARITY 102
LLU|FUN_022965-T1TROPONIN
LLU|FUN_022966-T1FCH AND DOUBLE SH3 DOMAINS PROTEIN
LLU|FUN_022967-T1
LLU|FUN_022968-T1APONTIC
LLU|FUN_022969-T1
LLU|FUN_022970-T1
LLU|FUN_022971-T1
LLU|FUN_022972-T1
LLU|FUN_022973-T1
LLU|FUN_022974-T1
LLU|FUN_022975-T1
LLU|FUN_022976-T1
LLU|FUN_022977-T1
LLU|FUN_022978-T1
LLU|FUN_022979-T1ATP-DEPENDENT RNA HELICASE RHLE-RELATED
LLU|FUN_022980-T1DUAL SPECIFICITY PROTEIN KINASE
LLU|FUN_022981-T1UNCHARACTERIZED
LLU|FUN_022982-T1
LLU|FUN_022983-T1NANOS PROTEIN
LLU|FUN_022984-T1
LLU|FUN_022985-T1PR DOMAIN ZINC FINGER PROTEIN
LLU|FUN_022986-T1
LLU|FUN_022987-T1TRANSFERASE, PUTATIVE-RELATED
LLU|FUN_022988-T1
LLU|FUN_022989-T1
LLU|FUN_022990-T1NUCLEAR RECEPTOR COACTIVATOR
LLU|FUN_022991-T1
LLU|FUN_022992-T1DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT
LLU|FUN_022993-T1
LLU|FUN_022994-T1
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