About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_023095-T1LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
LLU|FUN_023096-T1
LLU|FUN_023097-T1SI:CH211-189E2.2
LLU|FUN_023098-T1
LLU|FUN_023099-T1OVOCHYMASE-RELATED
LLU|FUN_023100-T1DENTIN MATRIX PROTEIN 4 PROTEIN FAM20
LLU|FUN_023101-T1
LLU|FUN_023102-T1
LLU|FUN_023103-T1
LLU|FUN_023104-T1
LLU|FUN_023105-T1
LLU|FUN_023106-T1
LLU|FUN_023107-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_023108-T1
LLU|FUN_023109-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_023110-T1
LLU|FUN_023111-T1REGULATOR OF G-PROTEIN SIGNALING 3
LLU|FUN_023112-T1REGULATOR OF G-PROTEIN SIGNALING 3
LLU|FUN_023113-T1
LLU|FUN_023114-T1
LLU|FUN_023115-T1REGULATOR OF G-PROTEIN SIGNALING 3
LLU|FUN_023116-T1REGULATOR OF G-PROTEIN SIGNALING 3
LLU|FUN_023117-T1REGULATOR OF G-PROTEIN SIGNALING 3
LLU|FUN_023118-T1
LLU|FUN_023119-T1
LLU|FUN_023120-T1REGULATOR OF G-PROTEIN SIGNALING 3
LLU|FUN_023121-T1
LLU|FUN_023122-T1
LLU|FUN_023123-T1
LLU|FUN_023124-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_023125-T160S RIBOSOMAL PROTEIN L35
LLU|FUN_023126-T1ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARC
LLU|FUN_023127-T1RAS GTPASE-RELATED
LLU|FUN_023128-T1
LLU|FUN_023129-T1DENN DOMAIN-CONTAINING
LLU|FUN_023130-T1
LLU|FUN_023131-T1
LLU|FUN_023132-T1
LLU|FUN_023133-T1
LLU|FUN_023134-T1GLYCOSYLTRANSFERASE-RELATED
LLU|FUN_023135-T1WD REPEAT CONTAINING PROTEIN 3 WDR3
LLU|FUN_023136-T1UNCHARACTERIZED
LLU|FUN_023137-T1PHOSPHATIDYLINOSITOL KINASE
LLU|FUN_023138-T1
LLU|FUN_023139-T1ZINC FINGER PROTEIN-LIKE 1
LLU|FUN_023140-T1CYTOKINE RECEPTOR
LLU|FUN_023141-T1
LLU|FUN_023142-T1CYTOKINE RECEPTOR
LLU|FUN_023143-T1CYTOKINE RECEPTOR
LLU|FUN_023144-T1CYTOKINE RECEPTOR
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