About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_023145-T1
LLU|FUN_023146-T1NETRIN/LAMININ-RELATED
LLU|FUN_023147-T1CONSORTIN
LLU|FUN_023148-T1
LLU|FUN_023149-T1PHOSPHOLIPASE D - RELATED
LLU|FUN_023150-T1
LLU|FUN_023151-T1TUDOR DOMAIN CONTAINING PROTEIN
LLU|FUN_023152-T1
LLU|FUN_023153-T1
LLU|FUN_023154-T1
LLU|FUN_023155-T1
LLU|FUN_023156-T1MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
LLU|FUN_023157-T1
LLU|FUN_023158-T1
LLU|FUN_023159-T1
LLU|FUN_023160-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_023161-T1ARMET-LIKE PROTEIN
LLU|FUN_023162-T1HEAT SHOCK PROTEIN 70KDA
LLU|FUN_023163-T1HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H
LLU|FUN_023164-T1
LLU|FUN_023165-T1DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED
LLU|FUN_023166-T1
LLU|FUN_023167-T1
LLU|FUN_023168-T1
LLU|FUN_023169-T1FAT ATYPICAL CADHERIN-RELATED
LLU|FUN_023170-T1METALLOPROTEASE
LLU|FUN_023171-T1N-ACYL-PHOSPHATIDYLETHANOLAMINE-HYDROLYZING PHOSPHOLIPASE D
LLU|FUN_023172-T1N-ACYL-PHOSPHATIDYLETHANOLAMINE-HYDROLYZING PHOSPHOLIPASE D
LLU|FUN_023173-T1
LLU|FUN_023174-T1
LLU|FUN_023175-T1
LLU|FUN_023176-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_023177-T1
LLU|FUN_023178-T1
LLU|FUN_023179-T1ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
LLU|FUN_023180-T1
LLU|FUN_023181-T1
LLU|FUN_023182-T1
LLU|FUN_023183-T1
LLU|FUN_023184-T1KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
LLU|FUN_023185-T1COILED COIL DOMAIN-CONTAINING PROTEIN 8, CCDC8
LLU|FUN_023186-T1
LLU|FUN_023187-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_023188-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_023189-T1CARBOHYDRATE SULFOTRANSFERASE
LLU|FUN_023190-T1
LLU|FUN_023191-T1CARBOHYDRATE SULFOTRANSFERASE
LLU|FUN_023192-T1CARBOHYDRATE SULFOTRANSFERASE
LLU|FUN_023193-T1RIKEN CDNA 9930021J03 GENE
LLU|FUN_023194-T1TUBULIN POLYGLUTAMYLASE
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