About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_023298-T1CYCLIN-DEPENDENT KINASE 2-INTERACTING PROTEIN
LLU|FUN_023299-T1SUGAR KINASE
LLU|FUN_023300-T1
LLU|FUN_023301-T1TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN
LLU|FUN_023302-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 97
LLU|FUN_023303-T1CYTOCHROME C OXIDASE PROTEIN 20
LLU|FUN_023304-T1UNCHARACTERIZED
LLU|FUN_023305-T1HYPOTHETICAL HEAT DOMAIN-CONTAINING
LLU|FUN_023306-T1
LLU|FUN_023307-T1HYDROLASE OF PHP SUPERFAMILY-RELATED PROTEIN
LLU|FUN_023308-T1KINETOCHORE-ASSOCIATED PROTEIN NSL1 HOMOLOG
LLU|FUN_023309-T1CHITINASE
LLU|FUN_023310-T1CHITINASE
LLU|FUN_023311-T1
LLU|FUN_023312-T1
LLU|FUN_023313-T1CHITINASE
LLU|FUN_023314-T1
LLU|FUN_023315-T1
LLU|FUN_023316-T1
LLU|FUN_023317-T1
LLU|FUN_023318-T1PESCADILLO - RELATED
LLU|FUN_023319-T1PESCADILLO - RELATED
LLU|FUN_023320-T1CHROMOSOME 1, WHOLE GENOME SHOTGUN SEQUENCE
LLU|FUN_023321-T160S RIBOSOMAL PROTEIN L6
LLU|FUN_023322-T1UNCHARACTERIZED
LLU|FUN_023323-T1
LLU|FUN_023324-T1SYNAPTIC VESICLE GLYCOPROTEIN 2
LLU|FUN_023325-T1
LLU|FUN_023326-T1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_023327-T1
LLU|FUN_023328-T1
LLU|FUN_023329-T1
LLU|FUN_023330-T1
LLU|FUN_023331-T1CORRINOID ADENOSYLTRANSFERASE
LLU|FUN_023332-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_023333-T1
LLU|FUN_023334-T1
LLU|FUN_023335-T1
LLU|FUN_023336-T1LOC100145250 PROTEIN
LLU|FUN_023337-T1
LLU|FUN_023338-T1
LLU|FUN_023339-T1
LLU|FUN_023340-T1
LLU|FUN_023341-T1
LLU|FUN_023342-T1
LLU|FUN_023343-T1
LLU|FUN_023344-T1
LLU|FUN_023345-T1RPE-SPONDIN
LLU|FUN_023346-T1
LLU|FUN_023347-T1
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