About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_023348-T1
LLU|FUN_023349-T1CLATHRIN HEAVY CHAIN RELATED
LLU|FUN_023350-T1
LLU|FUN_023351-T1SPERM-SPECIFIC FAMILY, CLASS Q
LLU|FUN_023352-T126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2
LLU|FUN_023353-T1
LLU|FUN_023354-T1
LLU|FUN_023355-T1
LLU|FUN_023356-T1
LLU|FUN_023357-T1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
LLU|FUN_023358-T1
LLU|FUN_023359-T1CHAPERONE ATP11
LLU|FUN_023360-T1LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
LLU|FUN_023362-T1
LLU|FUN_023363-T1UNCHARACTERIZED
LLU|FUN_023364-T1SODIUM/NUCLEOSIDE COTRANSPORTER
LLU|FUN_023365-T1
LLU|FUN_023366-T1
LLU|FUN_023367-T1TUBULIN FOLDING COFACTOR C
LLU|FUN_023368-T1AGAP011572-PA
LLU|FUN_023369-T1TUBULIN
LLU|FUN_023370-T1ADP-RIBOSYLATION-LIKE FACTOR 6-INTERACTING PROTEIN
LLU|FUN_023371-T160S RIBOSOMAL PROTEIN L37A
LLU|FUN_023372-T1UBIQUITIN LIGASE E3 ALPHA-RELATED
LLU|FUN_023373-T1
LLU|FUN_023374-T1PROTEIN CBG12054-RELATED
LLU|FUN_023375-T1PROTEIN CBG12054-RELATED
LLU|FUN_023376-T1TRANSFERASE, PUTATIVE-RELATED
LLU|FUN_023377-T1
LLU|FUN_023378-T1TRANSFERASE, PUTATIVE-RELATED
LLU|FUN_023379-T1TRANSFERASE, PUTATIVE-RELATED
LLU|FUN_023380-T1-
LLU|FUN_023381-T1HEME OXYGENASE
LLU|FUN_023382-T1HEME OXYGENASE
LLU|FUN_023383-T1HEME OXYGENASE
LLU|FUN_023384-T1FACIOGENITAL DYSPLASIA PROTEIN
LLU|FUN_023385-T1
LLU|FUN_023387-T1
LLU|FUN_023388-T1
LLU|FUN_023389-T1RHO GTPASE ACTIVATING PROTEIN AT 15B, ISOFORM C
LLU|FUN_023390-T1
LLU|FUN_023391-T1
LLU|FUN_023392-T1
LLU|FUN_023393-T1UNCHARACTERIZED
LLU|FUN_023394-T1
LLU|FUN_023395-T1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
LLU|FUN_023396-T1CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE
LLU|FUN_023397-T1
LLU|FUN_023398-T1
LLU|FUN_023399-T1
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