About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_023400-T1
LLU|FUN_023401-T1ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2
LLU|FUN_023402-T1GASTRULATION DEFECTIVE PROTEIN 1-RELATED
LLU|FUN_023403-T1PHOSPHOTRIESTERASE-RELATED
LLU|FUN_023404-T1PHOSPHOTRIESTERASE-RELATED
LLU|FUN_023405-T1
LLU|FUN_023406-T1
LLU|FUN_023407-T1DEATH DOMAIN-CONTAINING PROTEIN
LLU|FUN_023408-T1DEATH DOMAIN-CONTAINING PROTEIN
LLU|FUN_023409-T1
LLU|FUN_023410-T1DEATH DOMAIN-CONTAINING PROTEIN
LLU|FUN_023411-T1GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
LLU|FUN_023412-T1GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
LLU|FUN_023413-T1CYSTEINE PROTEASE FAMILY C1-RELATED
LLU|FUN_023414-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 178
LLU|FUN_023415-T1ADDITIONAL SEX COMBS LIKE PROTEIN ASXL
LLU|FUN_023416-T1MUCIN 4-RELATED
LLU|FUN_023417-T1REGULATOR OF CHROMOSOME CONDENSATION
LLU|FUN_023418-T1SPLICING FACTOR 3B SUBUNIT 5
LLU|FUN_023419-T1
LLU|FUN_023420-T1EG:EG0003.4 PROTEIN-RELATED
LLU|FUN_023421-T1
LLU|FUN_023422-T1
LLU|FUN_023423-T1
LLU|FUN_023424-T1
LLU|FUN_023425-T1
LLU|FUN_023426-T1
LLU|FUN_023427-T1MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3
LLU|FUN_023428-T1
LLU|FUN_023429-T1DYNAMIN
LLU|FUN_023430-T1
LLU|FUN_023431-T1
LLU|FUN_023432-T1OPSIN
LLU|FUN_023433-T1
LLU|FUN_023434-T1
LLU|FUN_023435-T1SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN
LLU|FUN_023436-T1
LLU|FUN_023437-T1
LLU|FUN_023438-T1
LLU|FUN_023439-T1
LLU|FUN_023440-T1
LLU|FUN_023441-T1
LLU|FUN_023442-T1
LLU|FUN_023443-T1
LLU|FUN_023444-T1
LLU|FUN_023445-T1
LLU|FUN_023446-T1NECTIN-RELATED
LLU|FUN_023447-T1POLYCYSTIN FAMILY MEMBER
LLU|FUN_023448-T1
LLU|FUN_023449-T1TRANSMEMBRANE PROTEIN
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