About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_023500-T1
LLU|FUN_023501-T1
LLU|FUN_023502-T1
LLU|FUN_023503-T1
LLU|FUN_023504-T1ZINC FINGER AND BTB DOMAIN-CONTAINING
LLU|FUN_023505-T1
LLU|FUN_023506-T1
LLU|FUN_023507-T1
LLU|FUN_023508-T1PDZ DOMAIN-CONTAINING PROTEIN
LLU|FUN_023509-T1
LLU|FUN_023510-T1PDZ DOMAIN-CONTAINING PROTEIN
LLU|FUN_023511-T1TRANSMEMBRANE PROTEIN
LLU|FUN_023512-T1PDZ DOMAIN-CONTAINING PROTEIN
LLU|FUN_023513-T1E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER
LLU|FUN_023514-T1ELONGATOR COMPLEX PROTEIN 2
LLU|FUN_023515-T1
LLU|FUN_023516-T1
LLU|FUN_023517-T1
LLU|FUN_023518-T1CRUMBS FAMILY MEMBER
LLU|FUN_023519-T1-
LLU|FUN_023520-T1
LLU|FUN_023521-T1MUCIN 4-RELATED
LLU|FUN_023522-T1
LLU|FUN_023523-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_023524-T1
LLU|FUN_023525-T1MUCIN 4-RELATED
LLU|FUN_023526-T1
LLU|FUN_023527-T1MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3
LLU|FUN_023528-T1
LLU|FUN_023529-T1
LLU|FUN_023530-T1
LLU|FUN_023531-T1
LLU|FUN_023532-T1
LLU|FUN_023533-T1TRANSMEMBRANE PROTEIN KIAA1109
LLU|FUN_023534-T1OVOCHYMASE-RELATED
LLU|FUN_023535-T1DEP DOMAIN CONTAINING PROTEIN 5
LLU|FUN_023536-T1WD40 REPEAT DOMAIN 95
LLU|FUN_023537-T1
LLU|FUN_023538-T1
LLU|FUN_023539-T1
LLU|FUN_023540-T1PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
LLU|FUN_023541-T1PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
LLU|FUN_023542-T1DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE
LLU|FUN_023543-T1SERINE INCORPORATOR
LLU|FUN_023544-T1ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
LLU|FUN_023545-T1
LLU|FUN_023546-T1
LLU|FUN_023547-T1
LLU|FUN_023548-T1
LLU|FUN_023549-T1
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