About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_023600-T1
LLU|FUN_023601-T1
LLU|FUN_023602-T1DYNEIN ASSEMBLY FACTOR 4, AXONEMAL
LLU|FUN_023603-T1STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL
LLU|FUN_023604-T1DET1 HOMOLOG DE-ETIOLATED-1 HOMOLOG
LLU|FUN_023605-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
LLU|FUN_023606-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
LLU|FUN_023607-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
LLU|FUN_023608-T1
LLU|FUN_023609-T1KINESIN-RELATED
LLU|FUN_023610-T1
LLU|FUN_023611-T1ZINC FINGER AND SCAN DOMAIN-CONTAINING
LLU|FUN_023612-T1
LLU|FUN_023613-T1
LLU|FUN_023614-T1NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12
LLU|FUN_023615-T1
LLU|FUN_023616-T1
LLU|FUN_023617-T1ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE
LLU|FUN_023618-T1UNCHARACTERIZED
LLU|FUN_023619-T1TRANSCRIPTIONAL REGULATOR ATRX
LLU|FUN_023621-T1RWD DOMAIN CONTAINING PROTEIN 2
LLU|FUN_023622-T1
LLU|FUN_023623-T1UNCHARACTERIZED
LLU|FUN_023624-T1
LLU|FUN_023625-T1
LLU|FUN_023626-T1
LLU|FUN_023627-T1
LLU|FUN_023628-T1NEUROPEPTIDE Y RECEPTOR
LLU|FUN_023629-T1
LLU|FUN_023630-T1
LLU|FUN_023631-T1
LLU|FUN_023632-T1
LLU|FUN_023633-T1
LLU|FUN_023634-T1
LLU|FUN_023635-T1CYCLINS
LLU|FUN_023636-T1CYCLINS
LLU|FUN_023637-T1
LLU|FUN_023638-T1
LLU|FUN_023639-T1
LLU|FUN_023640-T1
LLU|FUN_023641-T1CADHERIN-87A
LLU|FUN_023642-T1
LLU|FUN_023643-T1
LLU|FUN_023644-T1UNCHARACTERIZED
LLU|FUN_023645-T1MACROGLOBULIN / COMPLEMENT
LLU|FUN_023646-T1CHITINASE
LLU|FUN_023647-T1
LLU|FUN_023648-T1
LLU|FUN_023649-T1RIKEN CDNA 1700001C19 GENE
LLU|FUN_023650-T1SYNAPTOTAGMIN
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