About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_023701-T1SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
LLU|FUN_023702-T1RIBOSOMAL PROTEIN L27
LLU|FUN_023703-T1SPERMATOGENESIS-ASSOCIATED PROTEIN 20
LLU|FUN_023704-T1SPERMATOGENESIS-ASSOCIATED PROTEIN 20
LLU|FUN_023705-T1SPERMATOGENESIS-ASSOCIATED PROTEIN 20
LLU|FUN_023706-T1CYTOCHROME C OXIDASE SUBUNIT 6C
LLU|FUN_023707-T1
LLU|FUN_023708-T1VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
LLU|FUN_023709-T1
LLU|FUN_023710-T1
LLU|FUN_023711-T1
LLU|FUN_023712-T1VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
LLU|FUN_023713-T126S PROTESOME SUBUNIT 6
LLU|FUN_023714-T1IFT140/172-RELATED
LLU|FUN_023715-T1IFT140/172-RELATED
LLU|FUN_023716-T1
LLU|FUN_023717-T1
LLU|FUN_023718-T1
LLU|FUN_023719-T1TYROSINE-PROTEIN KINASE RECEPTOR
LLU|FUN_023720-T1NOVEL ZZ TYPE ZINC FINGER DOMAIN CONTAINING PROTEIN
LLU|FUN_023721-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
LLU|FUN_023722-T1TYROSINE-PROTEIN KINASE RECEPTOR
LLU|FUN_023723-T1NOVEL ZZ TYPE ZINC FINGER DOMAIN CONTAINING PROTEIN
LLU|FUN_023724-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
LLU|FUN_023725-T1NOVEL ZZ TYPE ZINC FINGER DOMAIN CONTAINING PROTEIN
LLU|FUN_023726-T1
LLU|FUN_023727-T1
LLU|FUN_023728-T1ATP SYNTHASE F CHAIN, MITOCHONDRIAL-RELATED
LLU|FUN_023729-T1AMINO ACID TRANSPORTER
LLU|FUN_023730-T1CENTROSOMAL PROTEIN OF 55 KDA
LLU|FUN_023731-T1
LLU|FUN_023732-T1
LLU|FUN_023733-T1
LLU|FUN_023734-T1
LLU|FUN_023735-T1UNNAMED PRODUCT
LLU|FUN_023736-T1
LLU|FUN_023737-T1
LLU|FUN_023738-T1
LLU|FUN_023739-T1EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
LLU|FUN_023740-T1
LLU|FUN_023741-T1
LLU|FUN_023742-T1GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1
LLU|FUN_023743-T1
LLU|FUN_023744-T1HISTIDINE-RICH GLYCOPROTEIN
LLU|FUN_023745-T1
LLU|FUN_023746-T1FMRFAMIDE RECEPTOR-RELATED
LLU|FUN_023747-T1GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1
LLU|FUN_023748-T1NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER
LLU|FUN_023749-T1AGAP005574-PA
LLU|FUN_023750-T1
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